RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.95□□□□□ -0.66
SIN3A-201ENST00000360439 PYGLP06737 847 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 SP4Q02446 784 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 RASIP1Q5U651 963 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 TBC1D16Q8TBP0 767 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 NRBP1Q9UHY1 535 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 TRIM75PA6NK02 468 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 CLTAP09496 248 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 ETF1P62495 437 aaKnown RBP10.95□□□□□ -0.66
SIN3A-201ENST00000360439 PPP4R3AQ6IN85 833 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 NSMFQ6X4W1 530 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 HDXQ7Z353 690 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 IFNL3Q8IZI9 196 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 C2orf69Q8N8R5 385 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 FAM81BQ96LP2 452 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 ARIH1Q9Y4X5 557 aaPredicted RBP10.95□□□□□ -0.66
SIN3A-201ENST00000360439 BCL9O00512 1426 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 KRT2P35908 639 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 SETDB1Q15047 1291 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 ZNF827Q17R98 1081 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 FKBP15Q5T1M5 1219 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 LINC00301Q8NCQ3 95 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 KCNV2Q8TDN2 545 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 KIFC2Q96AC6 838 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 SLC10A4Q96EP9 437 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 PGBD1Q96JS3 809 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 NACA2Q9H009 215 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 ZBED4O75132 1171 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 PRDX5P30044 214 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 SF3B3Q15393 1217 aaKnown RBP10.95□□□□□ -0.66
SIN3A-201ENST00000360439 SPA17Q15506 151 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 KRT26Q7Z3Y9 468 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 BCAS4Q8TDM0 211 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 LRRC4BQ9NT99 713 aa10.95□□□□□ -0.66
SIN3A-201ENST00000360439 CLCN6P51797 869 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 NDUFA8P51970 172 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 KIF22Q14807 665 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 SLC39A14Q15043 492 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 KRT40Q6A162 431 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 TSPAN18Q96SJ8 248 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 MAF1Q9H063 256 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 CRKP46108 304 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 IREB2P48200 963 aaKnown RBP10.94□□□□□ -0.66
SIN3A-201ENST00000360439 ZBTB17Q13105 803 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 BRD3Q15059 726 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 STYK1Q6J9G0 422 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 FAM76AQ8TAV0 307 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 FHDC1Q9C0D6 1143 aaPredicted RBP10.94□□□□□ -0.66
SIN3A-201ENST00000360439 MMADHCQ9H3L0 296 aaPredicted RBP10.94□□□□□ -0.66
SIN3A-201ENST00000360439 FMN2Q9NZ56 1722 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 MYO3BQ8WXR4 1341 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 USO1O60763 962 aaKnown RBP10.94□□□□□ -0.66
SIN3A-201ENST00000360439 PPARDQ03181 441 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 ICA1Q05084 483 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 PDIA6Q15084 440 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 ABCB5Q2M3G0 1257 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 HSP90AA5PQ58FG0 334 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 MPP4Q96JB8 637 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 CARD6Q9BX69 1037 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 TSGA10Q9BZW7 698 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 C6orf50Q9HD87 102 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 ATP6V1G1O75348 118 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 GDF11O95390 407 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 ZFXP17010 805 aaPredicted RBP10.94□□□□□ -0.66
SIN3A-201ENST00000360439 POSTNQ15063 836 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 SPECC1LQ69YQ0 1117 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 KLHL10Q6JEL2 608 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 CCDC174Q6PII3 467 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 C3orf20Q8ND61 904 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 KDM6AO15550 1401 aaPredicted RBP10.94□□□□□ -0.66
SIN3A-201ENST00000360439 PHLPP1O60346 1717 aa10.94□□□□□ -0.66
SIN3A-201ENST00000360439 PXDNQ92626 1479 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 PPP1R2P41236 205 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 TGFB2P61812 414 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 CD248Q9HCU0 757 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 CNOT7Q9UIV1 285 aaKnown RBP10.93□□□□□ -0.66
SIN3A-201ENST00000360439 MYBL1P10243 752 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 RFC1P35251 1148 aaPredicted RBP10.93□□□□□ -0.66
SIN3A-201ENST00000360439 KRT83P78385 493 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 FOXO4P98177 505 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 UBE3CQ15386 1083 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 USH1GQ495M9 461 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 EXOC1Q9NV70 894 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 FAM208AQ9UK61 1670 aaKnown RBP10.93□□□□□ -0.66
SIN3A-201ENST00000360439 STX10O60499 249 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 RPS6KA3P51812 740 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 C9orf131Q5VYM1 1079 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 GRAMD4Q6IC98 578 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 MICALL2Q8IY33 904 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 GBP7Q8N8V2 638 aaPredicted RBP10.93□□□□□ -0.66
SIN3A-201ENST00000360439 PLEKHG2Q9H7P9 1386 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 N4BP3O15049 544 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 AMPD3Q01432 767 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 PABPC4Q13310 644 aaKnown RBP eCLIP10.93□□□□□ -0.661e-8■■□□□ 11.9
SIN3A-201ENST00000360439 Q4G0T1 1027 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 SPICE1Q8N0Z3 855 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 CCDC110Q8TBZ0 833 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 FAM167BQ9BTA0 163 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 MYL10Q9BUA6 226 aa10.93□□□□□ -0.66
SIN3A-201ENST00000360439 PDE11AQ9HCR9 933 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms