RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 DCP1AQ9NPI6 582 aaPredicted RBP9.14□□□□□ -0.95
COMMD9-202ENST00000355500 HOOK1Q9UJC3 728 aaKnown RBP9.14□□□□□ -0.95
COMMD9-202ENST00000355500 PRKAB2O43741 272 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 BAG3O95817 575 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 ZNF165P49910 485 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 GALNT17Q6IS24 598 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 KRT77Q7Z794 578 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 MICU3Q86XE3 530 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 NPAS4Q8IUM7 802 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 SUPT20HQ8NEM7 779 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.13□□□□□ -0.95
COMMD9-202ENST00000355500 TANGO6Q9C0B7 1094 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 KIAA1468Q9P260 1216 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 PGAP2Q9UHJ9 254 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 CLIC4Q9Y696 253 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 GAKO14976 1311 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 PABPN1LA6NDY0 278 aaKnown RBP9.13□□□□□ -0.95
COMMD9-202ENST00000355500 GUCY2CP25092 1073 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 CHRNA5P30532 468 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 NOVP48745 357 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 GNAQP50148 359 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 ZNF75DP51815 510 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 NLRP12P59046 1061 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 TMTC3Q6ZXV5 915 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 GPC2Q8N158 579 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 ENAHQ8N8S7 591 aaPredicted RBP9.13□□□□□ -0.95
COMMD9-202ENST00000355500 TEKT1Q969V4 418 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 MPP4Q96JB8 637 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 PHF20Q9BVI0 1012 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 RRAGCQ9HB90 399 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 TTF2Q9UNY4 1162 aaKnown RBP9.13□□□□□ -0.95
COMMD9-202ENST00000355500 MROH7-TTC4A0A0A0MT08 1334 aa9.13□□□□□ -0.95
COMMD9-202ENST00000355500 RASSF10A6NK89 507 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 RNASEH2AO75792 299 aaKnown RBP9.12□□□□□ -0.95
COMMD9-202ENST00000355500 TROAPQ12815 778 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 NT5DC1Q5TFE4 455 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 TMC2Q8TDI7 906 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 IMPACTQ9P2X3 320 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.12□□□□□ -0.95
COMMD9-202ENST00000355500 SMTNL1A8MU46 457 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 PTPREP23469 700 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 KIF5BP33176 963 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 MAN1A1P33908 653 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 MLLT3P42568 568 aaPredicted RBP9.12□□□□□ -0.95
COMMD9-202ENST00000355500 KCNJ6P48051 423 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 FKBP1AP62942 108 aaKnown RBP9.12□□□□□ -0.95
COMMD9-202ENST00000355500 ORC2Q13416 577 aaPredicted RBP9.12□□□□□ -0.95
COMMD9-202ENST00000355500 IFIT1BQ5T764 474 aaKnown RBP9.12□□□□□ -0.95
COMMD9-202ENST00000355500 C12orf60Q5U649 245 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 DAGLBQ8NCG7 672 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 ATRIPQ8WXE1 791 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 SLC26A6Q9BXS9 759 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 DDX56Q9NY93 547 aaKnown RBP9.12□□□□□ -0.95
COMMD9-202ENST00000355500 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
COMMD9-202ENST00000355500 CNTNAP5Q8WYK1 1306 aa9.12□□□□□ -0.95
COMMD9-202ENST00000355500 LDHBP07195 334 aaKnown RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 PFKFB1P16118 471 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 TPM4P67936 248 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 LCA5Q86VQ0 697 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 GPIHBP1Q8IV16 184 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 MIGA1Q8NAN2 632 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 NKX2-3Q8TAU0 364 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 RPGRQ92834 1020 aaKnown RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 FERMT2Q96AC1 680 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 CASS4Q9NQ75 786 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 KMT5AQ9NQR1 393 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 SRPRBQ9Y5M8 271 aaKnown RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 MYH1P12882 1939 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 GOLGA6L19H0YKK7 550 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 hCG_1984214I3L0E3 225 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 ZNF202O95125 648 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 NDUFA8P51970 172 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 ZNF131P52739 623 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 USP50Q70EL3 339 aaPredicted RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 DZIP1Q86YF9 867 aaKnown RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 ZNF713Q8N859 430 aaPredicted RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 NELL1Q92832 810 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 TNFRSF25Q93038 417 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 SENP2Q9HC62 589 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 AATFQ9NY61 560 aaKnown RBP eCLIP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 COL2A1P02458 1487 aaPredicted RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 GPR75-ASB3A0A0A6YYF3 556 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 MYCLP1P12525 358 aaPredicted RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 CALML3P27482 149 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 HOXA7P31268 230 aaPredicted RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 KRT2P35908 639 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 AKAP17AQ02040 695 aaKnown RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 GNL2Q13823 731 aaKnown RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 AGAP9Q5VTM2 703 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 PDXDC1Q6P996 788 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 SAPCD2Q86UD0 394 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 DHX40Q8IX18 779 aaKnown RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 SP8Q8IXZ3 490 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 DIS3L2Q8IYB7 885 aaKnown RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 REM2Q8IYK8 340 aaPredicted RBP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.11□□□□□ -0.95
COMMD9-202ENST00000355500 ERP27Q96DN0 273 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 YIPF2Q9BWQ6 316 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 COMMD8Q9NX08 183 aa9.11□□□□□ -0.95
COMMD9-202ENST00000355500 CA12O43570 354 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms