RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SNX12Q9UMY4 172 aa20.74■□□□□ 0.91
SCARF1-202ENST00000348987 CICQ96RK0 1608 aaPredicted RBP20.73■□□□□ 0.91
SCARF1-202ENST00000348987 NF2P35240 595 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 KRT2P35908 639 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 RCAN1P53805 252 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 IFT88Q13099 833 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 ZNF662Q6ZS27 426 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 YTHDF3Q7Z739 585 aaKnown RBP20.73■□□□□ 0.91
SCARF1-202ENST00000348987 CELF1Q92879 486 aaKnown RBP20.73■□□□□ 0.91
SCARF1-202ENST00000348987 MIEF2Q96C03 454 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 C8orf37Q96NL8 207 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 GDAQ9Y2T3 454 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 BAZ2AQ9UIF9 1905 aaKnown RBP20.73■□□□□ 0.91
SCARF1-202ENST00000348987 IPO7O95373 1038 aaKnown RBP20.73■□□□□ 0.91
SCARF1-202ENST00000348987 CXCR5P32302 372 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 CYLC1P35663 651 aaPredicted RBP20.73■□□□□ 0.91
SCARF1-202ENST00000348987 SMTNP53814 917 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 FAM47AQ5JRC9 791 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 EMBQ6PCB8 327 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 CATIPQ7Z7H3 387 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 ODF2LQ9ULJ1 636 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 JAG2Q9Y219 1238 aa20.73■□□□□ 0.91
SCARF1-202ENST00000348987 RTL9Q8NET4 1388 aa20.72■□□□□ 0.91
SCARF1-202ENST00000348987 RASSF9O75901 435 aa20.72■□□□□ 0.91
SCARF1-202ENST00000348987 MTRQ99707 1265 aa20.72■□□□□ 0.91
SCARF1-202ENST00000348987 STIM2Q9P246 746 aa20.72■□□□□ 0.91
SCARF1-202ENST00000348987 MINPP1Q9UNW1 487 aa20.72■□□□□ 0.91
SCARF1-202ENST00000348987 WNK3Q9BYP7 1800 aa20.72■□□□□ 0.91
SCARF1-202ENST00000348987 PRPF3O43395 683 aaKnown RBP20.72■□□□□ 0.91
SCARF1-202ENST00000348987 PRCPP42785 496 aa20.72■□□□□ 0.91
SCARF1-202ENST00000348987 HDLBPQ00341 1268 aaKnown RBP20.72■□□□□ 0.91
SCARF1-202ENST00000348987 KIF5AQ12840 1032 aa20.72■□□□□ 0.91
SCARF1-202ENST00000348987 SRBD1Q8N5C6 995 aaKnown RBP20.72■□□□□ 0.91
SCARF1-202ENST00000348987 VEZTQ9HBM0 779 aa20.72■□□□□ 0.91
SCARF1-202ENST00000348987 SRP68Q9UHB9 627 aaKnown RBP20.72■□□□□ 0.91
SCARF1-202ENST00000348987 PHLPP1O60346 1717 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 FNBP4Q8N3X1 1017 aaPredicted RBP20.71■□□□□ 0.91
SCARF1-202ENST00000348987 TNFRSF25Q93038 417 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 PURBQ96QR8 312 aaKnown RBP20.71■□□□□ 0.91
SCARF1-202ENST00000348987 CCT8L2Q96SF2 557 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 CYP2D6P10635 497 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 PTGDRQ13258 359 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 MEA1Q16626 185 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 CEP85LQ5SZL2 805 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 HAUS3Q68CZ6 603 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 KDM7AQ6ZMT4 941 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 ZNF507Q8TCN5 953 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 CDCA7Q9BWT1 371 aaPredicted RBP20.71■□□□□ 0.91
SCARF1-202ENST00000348987 SLC40A1Q9NP59 571 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 CAPN6Q9Y6Q1 641 aa20.71■□□□□ 0.91
SCARF1-202ENST00000348987 ZNF233A6NK53 670 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 LGALS16A8MUM7 142 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 ECM2O94769 699 aaPredicted RBP20.7■□□□□ 0.9
SCARF1-202ENST00000348987 PTGISQ16647 500 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 AMIGO3Q86WK7 504 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 IQCA1Q86XH1 822 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 CEP57Q86XR8 500 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 CCDC43Q96MW1 224 aaKnown RBP20.7■□□□□ 0.9
SCARF1-202ENST00000348987 PAGR1Q9BTK6 254 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 LRWD1Q9UFC0 647 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 THRAP3Q9Y2W1 955 aaKnown RBP20.7■□□□□ 0.9
SCARF1-202ENST00000348987 PPP1R37O75864 691 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 XBP1P17861 261 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 KLK7P49862 253 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 PPARDQ03181 441 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 ZNF658Q5TYW1 1059 aaPredicted RBP20.7■□□□□ 0.9
SCARF1-202ENST00000348987 NFRKBQ6P4R8 1299 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 KRT26Q7Z3Y9 468 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 NLRP14Q86W24 1093 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 CAVIN3Q969G5 261 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 CACNA1SQ13698 1873 aa20.7■□□□□ 0.9
SCARF1-202ENST00000348987 TRIM21P19474 475 aaKnown RBP20.69■□□□□ 0.9
SCARF1-202ENST00000348987 PMS1P54277 932 aaKnown RBP20.69■□□□□ 0.9
SCARF1-202ENST00000348987 TMTC3Q6ZXV5 915 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 MYCBPAPQ8TBZ2 947 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 TFCP2L1Q9NZI6 479 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 A0A1W2PQC6 194 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 H7C1D1 291 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 CDR1P51861 262 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 CCDC96Q2M329 555 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 CAVIN4Q5BKX8 364 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 WLSQ5T9L3 541 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 FERMT2Q96AC1 680 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 EEF2KMTQ96G04 330 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 BRIP1Q9BX63 1249 aa20.69■□□□□ 0.9
SCARF1-202ENST00000348987 ZNHIT6Q9NWK9 470 aaKnown RBP20.69■□□□□ 0.9
SCARF1-202ENST00000348987 MYH6P13533 1939 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 CNTNAP5Q8WYK1 1306 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 ZNF263O14978 683 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 SSBP05455 408 aaKnown RBP eCLIP20.68■□□□□ 0.9
SCARF1-202ENST00000348987 FAM153BP0C7A2 387 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 PDHBP11177 359 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 NR1D1P20393 614 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 PRDX5P30044 214 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 MECOMQ03112 1051 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 UBE4AQ14139 1066 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 IL17AQ16552 155 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 FAM153CQ494X1 144 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 TTC38Q5R3I4 469 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 CFAP58Q5T655 872 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms