RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CFBP00751 764 aa30.96■■■□□ 2.55
SSBP4-202ENST00000348495 POLR2MP0CAP2 368 aa30.96■■■□□ 2.55
SSBP4-202ENST00000348495 DNM1Q05193 864 aaKnown RBP30.96■■■□□ 2.55
SSBP4-202ENST00000348495 CCDC194A0A1B0GVG4 234 aa30.95■■■□□ 2.55
SSBP4-202ENST00000348495 HOXA13P31271 388 aaPredicted RBP30.95■■■□□ 2.55
SSBP4-202ENST00000348495 TOB1P50616 345 aaPredicted RBP30.95■■■□□ 2.55
SSBP4-202ENST00000348495 AP3B2Q13367 1082 aa30.95■■■□□ 2.55
SSBP4-202ENST00000348495 MCTP2Q6DN12 878 aa30.95■■■□□ 2.55
SSBP4-202ENST00000348495 MAF1Q9H063 256 aa30.95■■■□□ 2.55
SSBP4-202ENST00000348495 ACAD9Q9H845 621 aa30.95■■■□□ 2.55
SSBP4-202ENST00000348495 MAP3K20Q9NYL2 800 aaKnown RBP30.95■■■□□ 2.55
SSBP4-202ENST00000348495 BAG4O95429 457 aaKnown RBP30.95■■■□□ 2.54
SSBP4-202ENST00000348495 SLC25A27O95847 323 aa30.95■■■□□ 2.54
SSBP4-202ENST00000348495 TAF1CQ15572 869 aaPredicted RBP30.95■■■□□ 2.54
SSBP4-202ENST00000348495 REM2Q8IYK8 340 aaPredicted RBP30.95■■■□□ 2.54
SSBP4-202ENST00000348495 GPRC5AQ8NFJ5 357 aa30.95■■■□□ 2.54
SSBP4-202ENST00000348495 COPB2P35606 906 aa30.94■■■□□ 2.54
SSBP4-202ENST00000348495 HTRA3P83110 453 aa30.94■■■□□ 2.54
SSBP4-202ENST00000348495 RILPL1Q5EBL4 403 aa30.94■■■□□ 2.54
SSBP4-202ENST00000348495 ANKRD13CQ8N6S4 541 aa30.94■■■□□ 2.54
SSBP4-202ENST00000348495 FOSP01100 380 aaPredicted RBP30.93■■■□□ 2.54
SSBP4-202ENST00000348495 NONOQ15233 471 aaKnown RBP eCLIP30.93■■■□□ 2.541e-6■■■■□ 20.3
SSBP4-202ENST00000348495 ATL3Q6DD88 541 aa30.93■■■□□ 2.54
SSBP4-202ENST00000348495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.93■■■□□ 2.548e-7■■■■□ 26.7
SSBP4-202ENST00000348495 FBXO40Q9UH90 709 aa30.93■■■□□ 2.54
SSBP4-202ENST00000348495 TRAPPC10P48553 1259 aa30.93■■■□□ 2.54
SSBP4-202ENST00000348495 FAM110CQ1W6H9 321 aa30.93■■■□□ 2.54
SSBP4-202ENST00000348495 SHCBP1Q8NEM2 672 aa30.93■■■□□ 2.54
SSBP4-202ENST00000348495 PGBD1Q96JS3 809 aa30.93■■■□□ 2.54
SSBP4-202ENST00000348495 R3HDMLQ9H3Y0 253 aa30.93■■■□□ 2.54
SSBP4-202ENST00000348495 ERCC3P19447 782 aa30.92■■■□□ 2.54
SSBP4-202ENST00000348495 ZNF396Q96N95 335 aaPredicted RBP30.92■■■□□ 2.54
SSBP4-202ENST00000348495 USP28Q96RU2 1077 aa30.92■■■□□ 2.54
SSBP4-202ENST00000348495 ANO3Q9BYT9 981 aa30.92■■■□□ 2.54
SSBP4-202ENST00000348495 VEGFBP49765 207 aa30.91■■■□□ 2.54
SSBP4-202ENST00000348495 RPS6P62753 249 aaKnown RBP30.91■■■□□ 2.54
SSBP4-202ENST00000348495 INF2Q27J81 1249 aa30.91■■■□□ 2.54
SSBP4-202ENST00000348495 RNF207Q6ZRF8 634 aa30.91■■■□□ 2.54
SSBP4-202ENST00000348495 NCAPG2Q86XI2 1143 aa30.91■■■□□ 2.54
SSBP4-202ENST00000348495 COL20A1Q9P218 1284 aa30.91■■■□□ 2.54
SSBP4-202ENST00000348495 TCHHQ07283 1943 aa30.91■■■□□ 2.54
SSBP4-202ENST00000348495 BCRP11274 1271 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 KRT85P78386 507 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 SLC30A10Q6XR72 485 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 SYTL5Q8TDW5 730 aaPredicted RBP30.9■■■□□ 2.54
SSBP4-202ENST00000348495 TBCKQ8TEA7 893 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 FTOQ9C0B1 505 aaKnown RBP eCLIP30.9■■■□□ 2.54
SSBP4-202ENST00000348495 MROH8Q9H579 483 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 A1CFQ9NQ94 594 aaKnown RBP30.9■■■□□ 2.54
SSBP4-202ENST00000348495 TFIP11Q9UBB9 837 aaKnown RBP30.9■■■□□ 2.54
SSBP4-202ENST00000348495 NOL7Q9UMY1 257 aaKnown RBP30.9■■■□□ 2.54
SSBP4-202ENST00000348495 SPDYE3A6NKU9 549 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 WNT7AO00755 349 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 TLR2O60603 784 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 MAP2K2P36507 400 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 CCNA1P78396 465 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 NSMFQ6X4W1 530 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 CRYGNQ8WXF5 182 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 CYP39A1Q9NYL5 469 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 CNPY2Q9Y2B0 182 aa30.9■■■□□ 2.54
SSBP4-202ENST00000348495 THSD7BQ9C0I4 1608 aa30.89■■■□□ 2.54
SSBP4-202ENST00000348495 EDIL3O43854 480 aa30.89■■■□□ 2.54
SSBP4-202ENST00000348495 ALDH1A1P00352 501 aa30.89■■■□□ 2.54
SSBP4-202ENST00000348495 BAATQ14032 418 aaPredicted RBP30.89■■■□□ 2.54
SSBP4-202ENST00000348495 C17orf99Q6UX52 265 aa30.89■■■□□ 2.54
SSBP4-202ENST00000348495 FCHSD1Q86WN1 690 aa30.89■■■□□ 2.54
SSBP4-202ENST00000348495 GBP4Q96PP9 640 aa30.89■■■□□ 2.54
SSBP4-202ENST00000348495 PORCNQ9H237 461 aa30.89■■■□□ 2.54
SSBP4-202ENST00000348495 ZFYVE28Q9HCC9 887 aa30.89■■■□□ 2.54
SSBP4-202ENST00000348495 CA12O43570 354 aa30.88■■■□□ 2.53
SSBP4-202ENST00000348495 CRHR2Q13324 411 aa30.88■■■□□ 2.53
SSBP4-202ENST00000348495 NBR1Q14596 966 aa30.88■■■□□ 2.53
SSBP4-202ENST00000348495 POLR3EQ9NVU0 708 aa30.88■■■□□ 2.53
SSBP4-202ENST00000348495 RTEL1Q9NZ71 1219 aa30.88■■■□□ 2.53
SSBP4-202ENST00000348495 CPA4Q9UI42 421 aa30.88■■■□□ 2.53
SSBP4-202ENST00000348495 CFAP45Q9UL16 551 aa30.88■■■□□ 2.53
SSBP4-202ENST00000348495 NEK8Q86SG6 692 aa30.87■■■□□ 2.53
SSBP4-202ENST00000348495 CLIC4Q9Y696 253 aa30.87■■■□□ 2.53
SSBP4-202ENST00000348495 SREBF1P36956 1147 aa30.87■■■□□ 2.53
SSBP4-202ENST00000348495 NASPP49321 788 aaPredicted RBP30.87■■■□□ 2.53
SSBP4-202ENST00000348495 ANO1Q5XXA6 986 aa30.87■■■□□ 2.53
SSBP4-202ENST00000348495 PCDHB6Q9Y5E3 794 aa30.87■■■□□ 2.53
SSBP4-202ENST00000348495 MYH7BA7E2Y1 1941 aa30.86■■■□□ 2.53
SSBP4-202ENST00000348495 PFASO15067 1338 aa30.86■■■□□ 2.53
SSBP4-202ENST00000348495 RPTORQ8N122 1335 aa30.86■■■□□ 2.53
SSBP4-202ENST00000348495 TTC38Q5R3I4 469 aa30.86■■■□□ 2.53
SSBP4-202ENST00000348495 EFCC1Q9HA90 598 aa30.86■■■□□ 2.53
SSBP4-202ENST00000348495 FRMPD4Q14CM0 1322 aa30.85■■■□□ 2.53
SSBP4-202ENST00000348495 NCLP19338 710 aaKnown RBP30.85■■■□□ 2.53
SSBP4-202ENST00000348495 ATP2B1P20020 1258 aa30.85■■■□□ 2.53
SSBP4-202ENST00000348495 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.85■■■□□ 2.53
SSBP4-202ENST00000348495 ANKRD35Q8N283 1001 aa30.84■■■□□ 2.53
SSBP4-202ENST00000348495 SCAND2PQ9GZW5 306 aaPredicted RBP30.84■■■□□ 2.53
SSBP4-202ENST00000348495 LCTP09848 1927 aa30.84■■■□□ 2.53
SSBP4-202ENST00000348495 USP11P51784 963 aa30.84■■■□□ 2.53
SSBP4-202ENST00000348495 CEBPZQ03701 1054 aaKnown RBP30.84■■■□□ 2.53
SSBP4-202ENST00000348495 SF3A1Q15459 793 aaKnown RBP30.84■■■□□ 2.53
SSBP4-202ENST00000348495 TAAR1Q96RJ0 339 aa30.84■■■□□ 2.53
SSBP4-202ENST00000348495 RCOR1Q9UKL0 485 aa30.84■■■□□ 2.53
SSBP4-202ENST00000348495 HSPA6P17066 643 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms