RNA–Protein interactions for RNA: ENST00000345254.8

SEC24C-202, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24C, Length 4,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-202ENST00000345254 POLR3EQ9NVU0 708 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 PCDHA7Q9UN72 937 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 ATP11BQ9Y2G3 1177 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 MORC2Q9Y6X9 1032 aaPredicted RBP10.57□□□□□ -0.72
SEC24C-202ENST00000345254 STK25O00506 426 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 DYNC1LI2O43237 492 aaPredicted RBP10.57□□□□□ -0.72
SEC24C-202ENST00000345254 TERF2Q15554 542 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 GNASQ5JWF2 1037 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 SPECC1LQ69YQ0 1117 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 FAM117BQ6P1L5 589 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 GLT1D1Q96MS3 346 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 RFX7Q2KHR2 1363 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 CA12O43570 354 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 HSPA1AP0DMV8 641 aaKnown RBP10.57□□□□□ -0.72
SEC24C-202ENST00000345254 HSPA1BP0DMV9 641 aaKnown RBP10.57□□□□□ -0.72
SEC24C-202ENST00000345254 AKR1B1P15121 316 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 PPP1R13BQ96KQ4 1090 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 FAM193BQ96PV7 902 aaPredicted RBP10.57□□□□□ -0.72
SEC24C-202ENST00000345254 ALS2CR12Q96Q35 445 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 FAM49AQ9H0Q0 323 aaPredicted RBP10.57□□□□□ -0.72
SEC24C-202ENST00000345254 TMX1Q9H3N1 280 aa10.57□□□□□ -0.72
SEC24C-202ENST00000345254 NWD1Q149M9 1564 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 WTIPA6NIX2 430 aaPredicted RBP10.56□□□□□ -0.72
SEC24C-202ENST00000345254 SCRN1Q12765 414 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 TSGA10IPQ3SY00 556 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 ZNF654Q8IZM8 581 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 NSUN7Q8NE18 718 aaKnown RBP10.56□□□□□ -0.72
SEC24C-202ENST00000345254 RABGGTAQ92696 567 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 CLMNQ96JQ2 1002 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 RGS2P41220 211 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 GCLCP48506 637 aaPredicted RBP10.56□□□□□ -0.72
SEC24C-202ENST00000345254 SMC1AQ14683 1233 aaKnown RBP10.56□□□□□ -0.72
SEC24C-202ENST00000345254 ZNF569Q5MCW4 686 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 DLK2Q6UY11 383 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 KRBA2Q6ZNG9 492 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 C11orf57Q6ZUT1 292 aaPredicted RBP10.56□□□□□ -0.72
SEC24C-202ENST00000345254 TRIML1Q8N9V2 468 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 CCDC51Q96ER9 411 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 VPS18Q9P253 973 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 A6NNZ2 444 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 KRT86O43790 486 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 STX10O60499 249 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 OAS2P29728 719 aaKnown RBP10.56□□□□□ -0.72
SEC24C-202ENST00000345254 MMP14P50281 582 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 TUBB8Q3ZCM7 444 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 FBXO18Q8NFZ0 1043 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 ZDHHC15Q96MV8 337 aa10.56□□□□□ -0.72
SEC24C-202ENST00000345254 KCNJ6P48051 423 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 FKBP1BP68106 108 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 KARSQ15046 597 aaKnown RBP10.55□□□□□ -0.72
SEC24C-202ENST00000345254 PPP2R5BQ15173 497 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 RABL6Q3YEC7 729 aaPredicted RBP10.55□□□□□ -0.72
SEC24C-202ENST00000345254 ATG9AQ7Z3C6 839 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 REXO1Q8N1G1 1221 aaKnown RBP10.55□□□□□ -0.72
SEC24C-202ENST00000345254 DNAI2Q9GZS0 605 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 SMCO2A6NFE2 343 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 OPA1O60313 960 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 GAS7O60861 476 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 PFKFB1P16118 471 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 CALRP27797 417 aaKnown RBP10.55□□□□□ -0.72
SEC24C-202ENST00000345254 TMOD1P28289 359 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 MCM7P33993 719 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 FMR1Q06787 632 aaKnown RBP eCLIP10.55□□□□□ -0.721e-6■■□□□ 14.1
SEC24C-202ENST00000345254 VGLL4Q14135 290 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 TMTC1Q8IUR5 882 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 LZTS2Q9BRK4 669 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 TEX13BQ9BXU2 312 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 NFE2L3Q9Y4A8 694 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 XRN1Q8IZH2 1706 aaKnown RBP10.55□□□□□ -0.72
SEC24C-202ENST00000345254 FLT1P17948 1338 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 CCDC169A6NNP5 214 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 KIF28PB7ZC32 967 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 ZSCAN20P17040 1043 aaPredicted RBP10.55□□□□□ -0.72
SEC24C-202ENST00000345254 KRT79Q5XKE5 535 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 NAPGQ99747 312 aaPredicted RBP10.55□□□□□ -0.72
SEC24C-202ENST00000345254 HMX1Q9NP08 348 aaPredicted RBP10.55□□□□□ -0.72
SEC24C-202ENST00000345254 LZTFL1Q9NQ48 299 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 IRF6O14896 467 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 DKC1O60832 514 aaKnown RBP eCLIP10.55□□□□□ -0.72
SEC24C-202ENST00000345254 CYP21A2P08686 494 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 SPDYE2Q495Y8 402 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 CRY2Q49AN0 593 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 RNF180Q86T96 592 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 TAF4BQ92750 862 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 BPIFA3Q9BQP9 254 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 KCNF1Q9H3M0 494 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 ACAD9Q9H845 621 aa10.55□□□□□ -0.72
SEC24C-202ENST00000345254 MARK3P27448 753 aa10.54□□□□□ -0.72
SEC24C-202ENST00000345254 NCAPH2Q6IBW4 605 aa10.54□□□□□ -0.72
SEC24C-202ENST00000345254 IGSF22Q8N9C0 903 aa10.54□□□□□ -0.72
SEC24C-202ENST00000345254 CEP95Q96GE4 821 aa10.54□□□□□ -0.72
SEC24C-202ENST00000345254 PPP1R16BQ96T49 567 aa10.54□□□□□ -0.72
SEC24C-202ENST00000345254 RMDN3Q96TC7 470 aa10.54□□□□□ -0.72
SEC24C-202ENST00000345254 HTATIP2Q9BUP3 242 aa10.54□□□□□ -0.72
SEC24C-202ENST00000345254 PPP2R2CQ9Y2T4 447 aa10.54□□□□□ -0.72
SEC24C-202ENST00000345254 AK9Q5TCS8 1911 aa10.54□□□□□ -0.72
SEC24C-202ENST00000345254 PDIA3P30101 505 aaKnown RBP10.54□□□□□ -0.72
SEC24C-202ENST00000345254 ZSCAN26Q16670 478 aa10.54□□□□□ -0.72
SEC24C-202ENST00000345254 PRR16Q569H4 304 aa10.54□□□□□ -0.72
SEC24C-202ENST00000345254 RRAGBQ5VZM2 374 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms