RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PTPDC1A2A3K4 754 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 NKRFO15226 690 aaKnown RBP eCLIP14.55□□□□□ -0.08
SGCA-202ENST00000344627 KPNA6O60684 536 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 PDE4AP27815 886 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 EPHB4P54760 987 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 CCDC178Q5BJE1 867 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 TMEM240Q5SV17 173 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 EEPD1Q7L9B9 569 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.55□□□□□ -0.08
SGCA-202ENST00000344627 DSCC1Q9BVC3 393 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 ZNF576Q9H609 170 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 KAT14Q9H8E8 782 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 IL23AQ9NPF7 189 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 POLR3EQ9NVU0 708 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 LAMA4Q16363 1823 aa14.55□□□□□ -0.08
SGCA-202ENST00000344627 LAMA2P24043 3122 aaKnown RBP14.54□□□□□ -0.08
SGCA-202ENST00000344627 MYADML2A6NDP7 307 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 CTAGE5O15320 804 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 GOLGA8HP0CJ92 632 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 CPT1AP50416 773 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 IRX5P78411 483 aaPredicted RBP14.54□□□□□ -0.08
SGCA-202ENST00000344627 ZNF543Q08ER8 600 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 ITGA7Q13683 1181 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 BAATQ14032 418 aaPredicted RBP14.54□□□□□ -0.08
SGCA-202ENST00000344627 TTC22Q5TAA0 569 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 RUFY2Q8WXA3 655 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 MYLIPQ8WY64 445 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 HERVK_113Q902F9 699 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 GAS2L1Q99501 681 aaPredicted RBP14.54□□□□□ -0.08
SGCA-202ENST00000344627 MSRAQ9UJ68 235 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 DDX49Q9Y6V7 483 aaKnown RBP14.54□□□□□ -0.08
SGCA-202ENST00000344627 RAD50Q92878 1312 aa14.54□□□□□ -0.08
SGCA-202ENST00000344627 WDR19Q8NEZ3 1342 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 ADCY6O43306 1168 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 DHX16O60231 1041 aaKnown RBP14.53□□□□□ -0.08
SGCA-202ENST00000344627 FGBP02675 491 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 CALML3P27482 149 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 DUSP28Q4G0W2 176 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 GPATCH4Q5T3I0 446 aaKnown RBP14.53□□□□□ -0.08
SGCA-202ENST00000344627 TAPT1Q6NXT6 567 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 DGKHQ86XP1 1220 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 PNMA1Q8ND90 353 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 DNERQ8NFT8 737 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 PURBQ96QR8 312 aaKnown RBP14.53□□□□□ -0.08
SGCA-202ENST00000344627 UBAC1Q9BSL1 405 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 KRT23Q9C075 422 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 UBA5Q9GZZ9 404 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 HIPK3Q9H422 1215 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 ZSWIM5Q9P217 1185 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 UNC80Q8N2C7 3258 aa14.53□□□□□ -0.08
SGCA-202ENST00000344627 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.52□□□□□ -0.09
SGCA-202ENST00000344627 RBM47A0AV96 593 aaKnown RBP14.52□□□□□ -0.09
SGCA-202ENST00000344627 NFIBO00712 420 aa14.52□□□□□ -0.09
SGCA-202ENST00000344627 DYNC1LI2O43237 492 aaPredicted RBP14.52□□□□□ -0.09
SGCA-202ENST00000344627 GSPT1P15170 499 aaKnown RBP14.52□□□□□ -0.09
SGCA-202ENST00000344627 CSF2RAP15509 400 aa14.52□□□□□ -0.09
SGCA-202ENST00000344627 BEX3Q00994 111 aa14.52□□□□□ -0.09
SGCA-202ENST00000344627 USH1GQ495M9 461 aa14.52□□□□□ -0.09
SGCA-202ENST00000344627 CXCL17Q6UXB2 119 aa14.52□□□□□ -0.09
SGCA-202ENST00000344627 KIAA1211Q6ZU35 1233 aa14.52□□□□□ -0.09
SGCA-202ENST00000344627 FBXO16Q8IX29 292 aaPredicted RBP14.52□□□□□ -0.09
SGCA-202ENST00000344627 RGS22Q8NE09 1264 aa14.52□□□□□ -0.09
SGCA-202ENST00000344627 ZSCAN10Q96SZ4 725 aaPredicted RBP14.52□□□□□ -0.09
SGCA-202ENST00000344627 CPVLQ9H3G5 476 aa14.52□□□□□ -0.09
SGCA-202ENST00000344627 CNNM2Q9H8M5 875 aa14.52□□□□□ -0.09
SGCA-202ENST00000344627 MYH6P13533 1939 aa14.52□□□□□ -0.09
SGCA-202ENST00000344627 SMPD1P17405 629 aa14.51□□□□□ -0.09
SGCA-202ENST00000344627 ALDH5A1P51649 535 aaPredicted RBP14.51□□□□□ -0.09
SGCA-202ENST00000344627 PTPN11Q06124 597 aaPredicted RBP14.51□□□□□ -0.09
SGCA-202ENST00000344627 TRDNQ13061 729 aa14.51□□□□□ -0.09
SGCA-202ENST00000344627 RNF207Q6ZRF8 634 aa14.51□□□□□ -0.09
SGCA-202ENST00000344627 ZNF365Q70YC5 407 aa14.51□□□□□ -0.09
SGCA-202ENST00000344627 VAT1LQ9HCJ6 419 aa14.51□□□□□ -0.09
SGCA-202ENST00000344627 GPHNQ9NQX3 736 aaPredicted RBP14.51□□□□□ -0.09
SGCA-202ENST00000344627 PDGFCQ9NRA1 345 aa14.51□□□□□ -0.09
SGCA-202ENST00000344627 ASTN1O14525 1302 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 TNKSO95271 1327 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 PARP1P09874 1014 aaKnown RBP14.5□□□□□ -0.09
SGCA-202ENST00000344627 SNHG28P0DPA3 235 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 RFC2P35250 354 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 GRIN2CQ14957 1233 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 TJAP1Q5JTD0 557 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 IFIT1BQ5T764 474 aaKnown RBP14.5□□□□□ -0.09
SGCA-202ENST00000344627 C16orf59Q7L2K0 433 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 ENAHQ8N8S7 591 aaPredicted RBP14.5□□□□□ -0.09
SGCA-202ENST00000344627 ATXN2LQ8WWM7 1075 aaKnown RBP14.5□□□□□ -0.09
SGCA-202ENST00000344627 CLEC4DQ8WXI8 215 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 PBX4Q9BYU1 374 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 WDR11Q9BZH6 1224 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 PPP1R12CQ9BZL4 782 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 IL25Q9H293 177 aa14.5□□□□□ -0.09
SGCA-202ENST00000344627 LCTP09848 1927 aa14.49□□□□□ -0.09
SGCA-202ENST00000344627 PTGS1P23219 599 aa14.49□□□□□ -0.09
SGCA-202ENST00000344627 CHMLP26374 656 aa14.49□□□□□ -0.09
SGCA-202ENST00000344627 PDE4DQ08499 809 aa14.49□□□□□ -0.09
SGCA-202ENST00000344627 ASPRV1Q53RT3 343 aa14.49□□□□□ -0.09
SGCA-202ENST00000344627 NFRKBQ6P4R8 1299 aa14.49□□□□□ -0.09
SGCA-202ENST00000344627 SLC30A10Q6XR72 485 aa14.49□□□□□ -0.09
SGCA-202ENST00000344627 ADGRF4Q8IZF3 695 aa14.49□□□□□ -0.09
SGCA-202ENST00000344627 SCFD2Q8WU76 684 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms