RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ZNF536O15090 1300 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 CAVIN2O95810 425 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 CUL4BQ13620 913 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 MORC3Q14149 939 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 PPP4R3AQ6IN85 833 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 IGSF22Q8N9C0 903 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 AGBL1Q96MI9 1066 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 RRAGDQ9NQL2 400 aaPredicted RBP15.36■□□□□ 0.05
CDC42-202ENST00000344548 DISC1Q9NRI5 854 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 SMYD4Q8IYR2 804 aaPredicted RBP15.36■□□□□ 0.05
CDC42-202ENST00000344548 IQUBQ8NA54 791 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 CYP2W1Q8TAV3 490 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 CHURC1Q8WUH1 139 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 SMARCE1Q969G3 411 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 TRIM44Q96DX7 344 aaPredicted RBP15.36■□□□□ 0.05
CDC42-202ENST00000344548 KLRG1Q96E93 195 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 WNK4Q96J92 1243 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 CCSER1Q9C0I3 900 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 SH2D4AQ9H788 454 aa15.36■□□□□ 0.05
CDC42-202ENST00000344548 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.36■□□□□ 0.05
CDC42-202ENST00000344548 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.36■□□□□ 0.05
CDC42-202ENST00000344548 DDX25Q9UHL0 483 aaKnown RBP15.36■□□□□ 0.05
CDC42-202ENST00000344548 ADM5C9JUS6 153 aa15.35■□□□□ 0.05
CDC42-202ENST00000344548 PTPRAP18433 802 aa15.35■□□□□ 0.05
CDC42-202ENST00000344548 VCAM1P19320 739 aa15.35■□□□□ 0.05
CDC42-202ENST00000344548 UBA7P41226 1012 aa15.35■□□□□ 0.05
CDC42-202ENST00000344548 FMR1Q06787 632 aaKnown RBP eCLIP15.35■□□□□ 0.052e-14■■■■■ 50.5
CDC42-202ENST00000344548 FCHSD1Q86WN1 690 aa15.35■□□□□ 0.05
CDC42-202ENST00000344548 SCYL3Q8IZE3 742 aa15.35■□□□□ 0.05
CDC42-202ENST00000344548 ZFP91Q96JP5 570 aaPredicted RBP15.35■□□□□ 0.05
CDC42-202ENST00000344548 RTN4Q9NQC3 1192 aaKnown RBP15.35■□□□□ 0.05
CDC42-202ENST00000344548 BECN2A8MW95 431 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 FAM86B1E9PN63 330 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 CFBP00751 764 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 FAM86B2P0C5J1 330 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 CD44P16070 742 aaKnown RBP15.34■□□□□ 0.05
CDC42-202ENST00000344548 PLCG1P19174 1290 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 LDHDQ86WU2 507 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 PLA2G4DQ86XP0 818 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 SPC24Q8NBT2 197 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 ZNF830Q96NB3 372 aaPredicted RBP15.34■□□□□ 0.05
CDC42-202ENST00000344548 TTC12Q9H892 705 aaPredicted RBP15.34■□□□□ 0.05
CDC42-202ENST00000344548 FEM1BQ9UK73 627 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 GOLGA6L19H0YKK7 550 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 PLA2G6O60733 806 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 STAT6P42226 847 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 ARHGAP4P98171 946 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 DCAF15Q66K64 600 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 KANK3Q6NY19 840 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 SLC30A10Q6XR72 485 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 CABP7Q86V35 215 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 BPIFA3Q9BQP9 254 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 ZHX2Q9Y6X8 837 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 DOCK1Q14185 1865 aa15.34■□□□□ 0.05
CDC42-202ENST00000344548 USP2O75604 605 aaPredicted RBP15.33■□□□□ 0.05
CDC42-202ENST00000344548 ATP1A3P13637 1013 aa15.33■□□□□ 0.05
CDC42-202ENST00000344548 ZNF75DP51815 510 aa15.33■□□□□ 0.05
CDC42-202ENST00000344548 UBXN2AP68543 259 aa15.33■□□□□ 0.05
CDC42-202ENST00000344548 ECM1Q16610 540 aa15.33■□□□□ 0.05
CDC42-202ENST00000344548 RRAGBQ5VZM2 374 aa15.33■□□□□ 0.05
CDC42-202ENST00000344548 LENG9Q96B70 501 aa15.33■□□□□ 0.05
CDC42-202ENST00000344548 TRIM5Q9C035 493 aa15.33■□□□□ 0.05
CDC42-202ENST00000344548 NAT10Q9H0A0 1025 aaKnown RBP15.33■□□□□ 0.05
CDC42-202ENST00000344548 ADARB2Q9NS39 739 aaKnown RBP15.33■□□□□ 0.05
CDC42-202ENST00000344548 LMOD1P29536 600 aaPredicted RBP15.33■□□□□ 0.04
CDC42-202ENST00000344548 FXR2P51116 673 aaKnown RBP eCLIP15.33■□□□□ 0.042e-6■□□□□ 9.9
CDC42-202ENST00000344548 FAM160B2Q86V87 743 aa15.33■□□□□ 0.04
CDC42-202ENST00000344548 TRMT44Q8IYL2 757 aaKnown RBP15.33■□□□□ 0.04
CDC42-202ENST00000344548 CPXCR1Q8N123 301 aa15.33■□□□□ 0.04
CDC42-202ENST00000344548 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
CDC42-202ENST00000344548 PNMA5Q96PV4 448 aa15.33■□□□□ 0.04
CDC42-202ENST00000344548 NRBP1Q9UHY1 535 aa15.33■□□□□ 0.04
CDC42-202ENST00000344548 HOOK1Q9UJC3 728 aaKnown RBP15.33■□□□□ 0.04
CDC42-202ENST00000344548 WDR46O15213 610 aaKnown RBP15.32■□□□□ 0.04
CDC42-202ENST00000344548 BACE1P56817 501 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 GRB10Q13322 594 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 AP3B2Q13367 1082 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 ORC2Q13416 577 aaPredicted RBP15.32■□□□□ 0.04
CDC42-202ENST00000344548 HSP90AA4PQ58FG1 418 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 AK8Q96MA6 479 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 SLF1Q9BQI6 1058 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 TANGO6Q9C0B7 1094 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 RPAP3Q9H6T3 665 aaPredicted RBP15.32■□□□□ 0.04
CDC42-202ENST00000344548 PHIPQ8WWQ0 1821 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 PIK3CDO00329 1044 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 NFIBO00712 420 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 COBLO75128 1261 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 SREBF1P36956 1147 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 TXLNAP40222 546 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 USP11P51784 963 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 HMGCS2P54868 508 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 PRR16Q569H4 304 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.32■□□□□ 0.04
CDC42-202ENST00000344548 KCNK18Q7Z418 384 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
CDC42-202ENST00000344548 ZNF280CQ8ND82 737 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 RASSF8Q8NHQ8 419 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 LPAR1Q92633 364 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 MBOAT7Q96N66 472 aa15.32■□□□□ 0.04
CDC42-202ENST00000344548 WDR18Q9BV38 432 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms