RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 NAALADL2Q58DX5 795 aa22.59■■□□□ 1.21
RTN1-202ENST00000342503 IGSF22Q8N9C0 903 aa22.58■■□□□ 1.21
RTN1-202ENST00000342503 PLIN2Q99541 437 aa22.58■■□□□ 1.21
RTN1-202ENST00000342503 ANO3Q9BYT9 981 aa22.58■■□□□ 1.21
RTN1-202ENST00000342503 DDX25Q9UHL0 483 aaKnown RBP22.58■■□□□ 1.21
RTN1-202ENST00000342503 SMCHD1A6NHR9 2005 aa22.58■■□□□ 1.2
RTN1-202ENST00000342503 LMOD1P29536 600 aaPredicted RBP22.57■■□□□ 1.2
RTN1-202ENST00000342503 FMR1Q06787 632 aaKnown RBP eCLIP22.57■■□□□ 1.2
RTN1-202ENST00000342503 ARHGAP27Q6ZUM4 889 aa22.57■■□□□ 1.2
RTN1-202ENST00000342503 DEFB129Q9H1M3 183 aa22.57■■□□□ 1.2
RTN1-202ENST00000342503 NRBP1Q9UHY1 535 aa22.57■■□□□ 1.2
RTN1-202ENST00000342503 FXR2P51116 673 aaKnown RBP eCLIP22.57■■□□□ 1.2
RTN1-202ENST00000342503 AP3B2Q13367 1082 aa22.57■■□□□ 1.2
RTN1-202ENST00000342503 CCDC186Q7Z3E2 898 aa22.57■■□□□ 1.2
RTN1-202ENST00000342503 CHURC1Q8WUH1 139 aa22.57■■□□□ 1.2
RTN1-202ENST00000342503 NAP1L4Q99733 375 aaKnown RBP22.57■■□□□ 1.2
RTN1-202ENST00000342503 SPON1Q9HCB6 807 aa22.57■■□□□ 1.2
RTN1-202ENST00000342503 SBF1O95248 1867 aa22.56■■□□□ 1.2
RTN1-202ENST00000342503 H7C1D1 291 aa22.56■■□□□ 1.2
RTN1-202ENST00000342503 GCFC2P16383 781 aaKnown RBP22.56■■□□□ 1.2
RTN1-202ENST00000342503 PTGS1P23219 599 aa22.56■■□□□ 1.2
RTN1-202ENST00000342503 TMEM266Q2M3C6 531 aa22.56■■□□□ 1.2
RTN1-202ENST00000342503 LRRC15Q8TF66 581 aa22.56■■□□□ 1.2
RTN1-202ENST00000342503 KIFC2Q96AC6 838 aa22.56■■□□□ 1.2
RTN1-202ENST00000342503 P2RX7Q99572 595 aaKnown RBP22.56■■□□□ 1.2
RTN1-202ENST00000342503 MMTAG2Q9BU76 263 aaKnown RBP22.56■■□□□ 1.2
RTN1-202ENST00000342503 ZNF341Q9BYN7 854 aa22.56■■□□□ 1.2
RTN1-202ENST00000342503 KCNF1Q9H3M0 494 aa22.56■■□□□ 1.2
RTN1-202ENST00000342503 FANCLQ9NW38 375 aa22.56■■□□□ 1.2
RTN1-202ENST00000342503 IFNKQ9P0W0 207 aa22.56■■□□□ 1.2
RTN1-202ENST00000342503 OPLAHO14841 1288 aa22.55■■□□□ 1.2
RTN1-202ENST00000342503 PLA2G6O60733 806 aa22.55■■□□□ 1.2
RTN1-202ENST00000342503 ATP1A3P13637 1013 aa22.55■■□□□ 1.2
RTN1-202ENST00000342503 PLCG1P19174 1290 aa22.55■■□□□ 1.2
RTN1-202ENST00000342503 MCTP2Q6DN12 878 aa22.55■■□□□ 1.2
RTN1-202ENST00000342503 FAM160B2Q86V87 743 aa22.55■■□□□ 1.2
RTN1-202ENST00000342503 ENOX1Q8TC92 643 aaKnown RBP22.55■■□□□ 1.2
RTN1-202ENST00000342503 RANBP17Q9H2T7 1088 aaKnown RBP22.55■■□□□ 1.2
RTN1-202ENST00000342503 LRWD1Q9UFC0 647 aa22.55■■□□□ 1.2
RTN1-202ENST00000342503 ZNF500O60304 480 aaPredicted RBP22.54■■□□□ 1.2
RTN1-202ENST00000342503 RPN1P04843 607 aaKnown RBP22.54■■□□□ 1.2
RTN1-202ENST00000342503 CD44P16070 742 aaKnown RBP22.54■■□□□ 1.2
RTN1-202ENST00000342503 USP11P51784 963 aa22.54■■□□□ 1.2
RTN1-202ENST00000342503 FANCCQ00597 558 aa22.54■■□□□ 1.2
RTN1-202ENST00000342503 CT47A1Q5JQC4 288 aaPredicted RBP22.54■■□□□ 1.2
RTN1-202ENST00000342503 NBPF12Q5TAG4 269 aaPredicted RBP22.54■■□□□ 1.2
RTN1-202ENST00000342503 CCDC174Q6PII3 467 aa22.54■■□□□ 1.2
RTN1-202ENST00000342503 FEZ1Q99689 392 aa22.54■■□□□ 1.2
RTN1-202ENST00000342503 XPO4Q9C0E2 1151 aaKnown RBP22.54■■□□□ 1.2
RTN1-202ENST00000342503 CUEDC2Q9H467 287 aa22.54■■□□□ 1.2
RTN1-202ENST00000342503 FEM1BQ9UK73 627 aa22.54■■□□□ 1.2
RTN1-202ENST00000342503 DOCK1Q14185 1865 aa22.54■■□□□ 1.2
RTN1-202ENST00000342503 ERCC5P28715 1186 aaPredicted RBP22.54■■□□□ 1.2
RTN1-202ENST00000342503 CCDC144BQ3MJ40 725 aa22.54■■□□□ 1.2
RTN1-202ENST00000342503 TRMT44Q8IYL2 757 aaKnown RBP22.54■■□□□ 1.2
RTN1-202ENST00000342503 HAS1Q92839 578 aa22.54■■□□□ 1.2
RTN1-202ENST00000342503 MED15Q96RN5 788 aa22.54■■□□□ 1.2
RTN1-202ENST00000342503 KBTBD4Q9NVX7 518 aa22.54■■□□□ 1.2
RTN1-202ENST00000342503 CTNND1O60716 968 aaKnown RBP22.53■■□□□ 1.2
RTN1-202ENST00000342503 LMNB1P20700 586 aa22.53■■□□□ 1.2
RTN1-202ENST00000342503 TRAF1Q13077 416 aa22.53■■□□□ 1.2
RTN1-202ENST00000342503 PDIA5Q14554 519 aa22.53■■□□□ 1.2
RTN1-202ENST00000342503 ANGEL2Q5VTE6 544 aaKnown RBP22.53■■□□□ 1.2
RTN1-202ENST00000342503 SMYD4Q8IYR2 804 aaPredicted RBP22.53■■□□□ 1.2
RTN1-202ENST00000342503 TRPM4Q8TD43 1214 aa22.53■■□□□ 1.2
RTN1-202ENST00000342503 CRYGNQ8WXF5 182 aa22.53■■□□□ 1.2
RTN1-202ENST00000342503 RAB34Q9BZG1 259 aa22.53■■□□□ 1.2
RTN1-202ENST00000342503 MAGEF1Q9HAY2 307 aa22.53■■□□□ 1.2
RTN1-202ENST00000342503 GINM1Q9NU53 330 aa22.53■■□□□ 1.2
RTN1-202ENST00000342503 GPRC5DQ9NZD1 345 aa22.53■■□□□ 1.2
RTN1-202ENST00000342503 CYP3A7-CYP3A51PA0A087WV96 503 aa22.52■■□□□ 1.2
RTN1-202ENST00000342503 PPP1R3GB7ZBB8 358 aa22.52■■□□□ 1.2
RTN1-202ENST00000342503 FOSP01100 380 aaPredicted RBP22.52■■□□□ 1.2
RTN1-202ENST00000342503 CYP3A7P24462 503 aa22.52■■□□□ 1.2
RTN1-202ENST00000342503 CALML4Q96GE6 196 aa22.52■■□□□ 1.2
RTN1-202ENST00000342503 MBOAT7Q96N66 472 aa22.52■■□□□ 1.2
RTN1-202ENST00000342503 FBXO28Q9NVF7 368 aa22.52■■□□□ 1.2
RTN1-202ENST00000342503 RMND1Q9NWS8 449 aa22.52■■□□□ 1.2
RTN1-202ENST00000342503 POTEMA6NI47 508 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 SPDYE3A6NKU9 549 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 MARCH6O60337 910 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 ARHGAP4P98171 946 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 SAMD1Q6SPF0 538 aaPredicted RBP22.51■■□□□ 1.19
RTN1-202ENST00000342503 APOBEC3FQ8IUX4 373 aaKnown RBP22.51■■□□□ 1.19
RTN1-202ENST00000342503 GPC2Q8N158 579 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 FHDC1Q9C0D6 1143 aaPredicted RBP22.51■■□□□ 1.19
RTN1-202ENST00000342503 NFE2L3Q9Y4A8 694 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 MYL1P05976 194 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 HOXA13P31271 388 aaPredicted RBP22.51■■□□□ 1.19
RTN1-202ENST00000342503 INPP5BP32019 993 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 GRB10Q13322 594 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 DCAF15Q66K64 600 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 MOXD1Q6UVY6 613 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 GJA10Q969M2 543 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 PNMA5Q96PV4 448 aa22.51■■□□□ 1.19
RTN1-202ENST00000342503 PIK3CDO00329 1044 aa22.5■■□□□ 1.19
RTN1-202ENST00000342503 ZNF658Q5TYW1 1059 aaPredicted RBP22.5■■□□□ 1.19
RTN1-202ENST00000342503 KLHL10Q6JEL2 608 aa22.5■■□□□ 1.19
RTN1-202ENST00000342503 KLRC4O43908 158 aa22.49■■□□□ 1.19
RTN1-202ENST00000342503 SERPINC1P01008 464 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms