RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 HOMER1Q86YM7 354 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 TMTC2Q8N394 836 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 KLHDC9Q8NEP7 349 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 DNERQ8NFT8 737 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 TBC1D5Q92609 795 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 PIGSQ96S52 555 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 MAP3K14Q99558 947 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 LRRC2Q9BYS8 371 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 MAF1Q9H063 256 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 UPF3AQ9H1J1 476 aaKnown RBP16.98■□□□□ 0.31
ERCC1-203ENST00000340192 VTA1Q9NP79 307 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 PDGFCQ9NRA1 345 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 A0A1W2PQ45 241 aaPredicted RBP16.97■□□□□ 0.31
ERCC1-203ENST00000340192 A0A1W2PQY0 241 aa16.97■□□□□ 0.31
ERCC1-203ENST00000340192 CYTH3O43739 400 aa16.97■□□□□ 0.31
ERCC1-203ENST00000340192 C6orf222P0C671 652 aaPredicted RBP16.97■□□□□ 0.31
ERCC1-203ENST00000340192 LIFRP42702 1097 aa16.97■□□□□ 0.31
ERCC1-203ENST00000340192 GJA9P57773 515 aa16.97■□□□□ 0.31
ERCC1-203ENST00000340192 RTP1P59025 263 aa16.97■□□□□ 0.31
ERCC1-203ENST00000340192 IRX5P78411 483 aaPredicted RBP16.97■□□□□ 0.31
ERCC1-203ENST00000340192 KCNA10Q16322 511 aa16.97■□□□□ 0.31
ERCC1-203ENST00000340192 ADCK5Q3MIX3 580 aa16.97■□□□□ 0.31
ERCC1-203ENST00000340192 TSGA10IPQ3SY00 556 aa16.97■□□□□ 0.31
ERCC1-203ENST00000340192 NOL8Q76FK4 1167 aaKnown RBP16.97■□□□□ 0.31
ERCC1-203ENST00000340192 MCF2L2Q86YR7 1114 aa16.97■□□□□ 0.31
ERCC1-203ENST00000340192 CTCFLQ8NI51 663 aaPredicted RBP16.97■□□□□ 0.31
ERCC1-203ENST00000340192 NEK1Q96PY6 1258 aa16.97■□□□□ 0.31
ERCC1-203ENST00000340192 TSEN34Q9BSV6 310 aaKnown RBP16.97■□□□□ 0.31
ERCC1-203ENST00000340192 PCDHA1Q9Y5I3 950 aa16.97■□□□□ 0.31
ERCC1-203ENST00000340192 OPLAHO14841 1288 aa16.96■□□□□ 0.31
ERCC1-203ENST00000340192 SMPD1P17405 629 aa16.96■□□□□ 0.31
ERCC1-203ENST00000340192 EDNRBP24530 442 aa16.96■□□□□ 0.31
ERCC1-203ENST00000340192 CST5P28325 142 aaPredicted RBP16.96■□□□□ 0.31
ERCC1-203ENST00000340192 KIF5BP33176 963 aa16.96■□□□□ 0.31
ERCC1-203ENST00000340192 ACLYP53396 1101 aa16.96■□□□□ 0.31
ERCC1-203ENST00000340192 PDE4DQ08499 809 aa16.96■□□□□ 0.31
ERCC1-203ENST00000340192 SNX17Q15036 470 aa16.96■□□□□ 0.31
ERCC1-203ENST00000340192 IQSEC1Q6DN90 963 aa16.96■□□□□ 0.31
ERCC1-203ENST00000340192 CCSAPQ6IQ19 270 aaPredicted RBP16.96■□□□□ 0.31
ERCC1-203ENST00000340192 SYTL5Q8TDW5 730 aaPredicted RBP16.96■□□□□ 0.31
ERCC1-203ENST00000340192 MPHOSPH6Q99547 160 aaKnown RBP16.96■□□□□ 0.31
ERCC1-203ENST00000340192 SPC25Q9HBM1 224 aa16.96■□□□□ 0.31
ERCC1-203ENST00000340192 COL20A1Q9P218 1284 aa16.96■□□□□ 0.31
ERCC1-203ENST00000340192 GNEQ9Y223 722 aaKnown RBP16.96■□□□□ 0.31
ERCC1-203ENST00000340192 ATP11BQ9Y2G3 1177 aa16.96■□□□□ 0.31
ERCC1-203ENST00000340192 PNMA6FA0A0J9YX94 578 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 MOXD2PA6NHM9 499 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 CTAGE5O15320 804 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 CFBP00751 764 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 PTGS1P23219 599 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 EXOSC10Q01780 885 aaKnown RBP16.95■□□□□ 0.3
ERCC1-203ENST00000340192 KRT32Q14532 448 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 GNASQ5JWF2 1037 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 TMEM63BQ5T3F8 832 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 TLK2Q86UE8 772 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 PRO3102Q9H379 93 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 PCDH10Q9P2E7 1040 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 RBM27Q9P2N5 1060 aaKnown RBP16.95■□□□□ 0.3
ERCC1-203ENST00000340192 SLC12A7Q9Y666 1083 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 KIAA1217Q5T5P2 1943 aa16.95■□□□□ 0.3
ERCC1-203ENST00000340192 B4DLN1 442 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 REC8O95072 547 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 ASGR1P07306 291 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 CALM1P0DP23 149 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 CALM2P0DP24 149 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 CALM3P0DP25 149 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 RXRAP19793 462 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 HSD17B4P51659 736 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 MRPL12P52815 198 aaKnown RBP16.94■□□□□ 0.3
ERCC1-203ENST00000340192 NKX3-2P78367 333 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 TRAF1Q13077 416 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 C1orf53Q5VUE5 145 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 DHX32Q7L7V1 743 aaKnown RBP16.94■□□□□ 0.3
ERCC1-203ENST00000340192 SGMS1Q86VZ5 419 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 PCSK9Q8NBP7 692 aaKnown RBP16.94■□□□□ 0.3
ERCC1-203ENST00000340192 PIBF1Q8WXW3 757 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 TCEANC2Q96MN5 208 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 TAAR1Q96RJ0 339 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 SPZ1Q9BXG8 430 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 WDR11Q9BZH6 1224 aa16.94■□□□□ 0.3
ERCC1-203ENST00000340192 LTBP2Q14767 1821 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 PLEKHA8P1O95397 391 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 HSPA4P34932 840 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 MAGEA10P43363 369 aaPredicted RBP16.93■□□□□ 0.3
ERCC1-203ENST00000340192 BEX3Q00994 111 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 GHRHRQ02643 423 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 DUSP28Q4G0W2 176 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 RAB11FIP4Q86YS3 637 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 CMTR1Q8N1G2 835 aaKnown RBP16.93■□□□□ 0.3
ERCC1-203ENST00000340192 NSUN6Q8TEA1 469 aaKnown RBP16.93■□□□□ 0.3
ERCC1-203ENST00000340192 KCNB2Q92953 911 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 RMDN3Q96TC7 470 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 LZTS2Q9BRK4 669 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 AP5M1Q9H0R1 490 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 STARD7Q9NQZ5 370 aa16.93■□□□□ 0.3
ERCC1-203ENST00000340192 RBM47A0AV96 593 aaKnown RBP16.92■□□□□ 0.3
ERCC1-203ENST00000340192 DYNC1LI2O43237 492 aaPredicted RBP16.92■□□□□ 0.3
ERCC1-203ENST00000340192 HMGB1P09429 215 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms