RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 FEZ1Q99689 392 aa25.35■■□□□ 1.65
PDLIM2-203ENST00000339162 H7C1D1 291 aa25.34■■□□□ 1.65
PDLIM2-203ENST00000339162 IKBKBO14920 756 aa25.34■■□□□ 1.65
PDLIM2-203ENST00000339162 ATP1A3P13637 1013 aa25.34■■□□□ 1.65
PDLIM2-203ENST00000339162 MYL5Q02045 173 aa25.34■■□□□ 1.65
PDLIM2-203ENST00000339162 FMR1Q06787 632 aaKnown RBP eCLIP25.34■■□□□ 1.65
PDLIM2-203ENST00000339162 CABP7Q86V35 215 aa25.34■■□□□ 1.65
PDLIM2-203ENST00000339162 ANO3Q9BYT9 981 aa25.34■■□□□ 1.65
PDLIM2-203ENST00000339162 CCSER1Q9C0I3 900 aa25.34■■□□□ 1.65
PDLIM2-203ENST00000339162 HOXA13P31271 388 aaPredicted RBP25.33■■□□□ 1.65
PDLIM2-203ENST00000339162 TRMT44Q8IYL2 757 aaKnown RBP25.33■■□□□ 1.65
PDLIM2-203ENST00000339162 PYM1Q9BRP8 204 aaKnown RBP25.33■■□□□ 1.65
PDLIM2-203ENST00000339162 DDX25Q9UHL0 483 aaKnown RBP25.33■■□□□ 1.65
PDLIM2-203ENST00000339162 OPLAHO14841 1288 aa25.33■■□□□ 1.65
PDLIM2-203ENST00000339162 PRKCSHP14314 528 aaPredicted RBP25.33■■□□□ 1.65
PDLIM2-203ENST00000339162 HSP90AA4PQ58FG1 418 aa25.33■■□□□ 1.65
PDLIM2-203ENST00000339162 TRIML1Q8N9V2 468 aa25.33■■□□□ 1.65
PDLIM2-203ENST00000339162 SMCHD1A6NHR9 2005 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 INPP5BP32019 993 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 ORC2Q13416 577 aaPredicted RBP25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 PPP4R3AQ6IN85 833 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 MLKLQ8NB16 471 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 AK8Q96MA6 479 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 SH2D4AQ9H788 454 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 MYH7BA7E2Y1 1941 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 PLCG1P19174 1290 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 LMNB1P20700 586 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 PTGS1P23219 599 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 IGSF22Q8N9C0 903 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 GSDMAQ96QA5 445 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 GLT8D2Q9H1C3 349 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 FANCLQ9NW38 375 aa25.32■■□□□ 1.64
PDLIM2-203ENST00000339162 POTEMA6NI47 508 aa25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 EPS15P42566 896 aa25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 TPM4P67936 248 aa25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 CCDC186Q7Z3E2 898 aa25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 MMTAG2Q9BU76 263 aaKnown RBP25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 CD44P16070 742 aaKnown RBP25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 KLHL10Q6JEL2 608 aa25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 MRFAP1L1Q96HT8 127 aa25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 MED15Q96RN5 788 aa25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 GPRC5DQ9NZD1 345 aa25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 IFNKQ9P0W0 207 aa25.31■■□□□ 1.64
PDLIM2-203ENST00000339162 GOLGA6L6A8MZA4 724 aa25.3■■□□□ 1.64
PDLIM2-203ENST00000339162 GTPBP6O43824 516 aaPredicted RBP25.3■■□□□ 1.64
PDLIM2-203ENST00000339162 CHURC1Q8WUH1 139 aa25.3■■□□□ 1.64
PDLIM2-203ENST00000339162 HAS1Q92839 578 aa25.3■■□□□ 1.64
PDLIM2-203ENST00000339162 LRWD1Q9UFC0 647 aa25.3■■□□□ 1.64
PDLIM2-203ENST00000339162 CCDC144BQ3MJ40 725 aa25.29■■□□□ 1.64
PDLIM2-203ENST00000339162 TBC1D5Q92609 795 aa25.29■■□□□ 1.64
PDLIM2-203ENST00000339162 XPO4Q9C0E2 1151 aaKnown RBP25.29■■□□□ 1.64
PDLIM2-203ENST00000339162 KCNF1Q9H3M0 494 aa25.29■■□□□ 1.64
PDLIM2-203ENST00000339162 CLCN1P35523 988 aa25.29■■□□□ 1.64
PDLIM2-203ENST00000339162 MARCH6O60337 910 aa25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 FXR2P51116 673 aaKnown RBP eCLIP25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 HIRAP54198 1017 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 GPC2Q8N158 579 aa25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 GGA3Q9NZ52 723 aa25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 DACH1Q9UI36 760 aa25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 SPDYE3A6NKU9 549 aa25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 CTNND1O60716 968 aaKnown RBP25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 TMEM266Q2M3C6 531 aa25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 FCHSD1Q86WN1 690 aa25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 ZKSCAN4Q969J2 545 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 NUDT12Q9BQG2 462 aa25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 RANBP17Q9H2T7 1088 aaKnown RBP25.28■■□□□ 1.64
PDLIM2-203ENST00000339162 ATAD5Q96QE3 1844 aa25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 CDC25BP30305 580 aa25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 STX17P56962 302 aa25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 ARHGAP4P98171 946 aa25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 FANCCQ00597 558 aa25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 AP3B2Q13367 1082 aa25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 DHX8Q14562 1220 aaKnown RBP25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 NFE2L3Q9Y4A8 694 aa25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 COBLO75128 1261 aa25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 CFBP00751 764 aa25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 RPN1P04843 607 aaKnown RBP25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 FEM1BQ9UK73 627 aa25.27■■□□□ 1.64
PDLIM2-203ENST00000339162 DDNO94850 711 aaPredicted RBP25.26■■□□□ 1.63
PDLIM2-203ENST00000339162 GCFC2P16383 781 aaKnown RBP25.26■■□□□ 1.63
PDLIM2-203ENST00000339162 USP11P51784 963 aa25.26■■□□□ 1.63
PDLIM2-203ENST00000339162 FILIP1Q7Z7B0 1213 aa25.26■■□□□ 1.63
PDLIM2-203ENST00000339162 KBTBD4Q9NVX7 518 aa25.26■■□□□ 1.63
PDLIM2-203ENST00000339162 PPP1R3GB7ZBB8 358 aa25.25■■□□□ 1.63
PDLIM2-203ENST00000339162 GRB10Q13322 594 aa25.25■■□□□ 1.63
PDLIM2-203ENST00000339162 MTMR2Q13614 643 aa25.25■■□□□ 1.63
PDLIM2-203ENST00000339162 FAM160B2Q86V87 743 aa25.25■■□□□ 1.63
PDLIM2-203ENST00000339162 CRYGNQ8WXF5 182 aa25.25■■□□□ 1.63
PDLIM2-203ENST00000339162 CALML4Q96GE6 196 aa25.25■■□□□ 1.63
PDLIM2-203ENST00000339162 PCDHA12Q9UN75 941 aa25.25■■□□□ 1.63
PDLIM2-203ENST00000339162 MAPK8IP1Q9UQF2 711 aa25.25■■□□□ 1.63
PDLIM2-203ENST00000339162 SERPINC1P01008 464 aa25.24■■□□□ 1.63
PDLIM2-203ENST00000339162 LRMPQ12912 555 aa25.24■■□□□ 1.63
PDLIM2-203ENST00000339162 PRR16Q569H4 304 aa25.24■■□□□ 1.63
PDLIM2-203ENST00000339162 DLK2Q6UY11 383 aa25.24■■□□□ 1.63
PDLIM2-203ENST00000339162 C17orf53Q8N3J3 647 aaPredicted RBP25.24■■□□□ 1.63
PDLIM2-203ENST00000339162 ENOX1Q8TC92 643 aaKnown RBP25.24■■□□□ 1.63
PDLIM2-203ENST00000339162 WRNIP1Q96S55 665 aa25.24■■□□□ 1.63
PDLIM2-203ENST00000339162 SAMSN1Q9NSI8 373 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms