RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 POLLQ9UGP5 575 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 FAM184BQ9ULE4 1060 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 XRN1Q8IZH2 1706 aaKnown RBP7.62□□□□□ -1.19
SF3B1-201ENST00000335508 GAKO14976 1311 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 SLC26A4O43511 780 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 LIG1P18858 919 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 U2AF2P26368 475 aaKnown RBP eCLIP7.62□□□□□ -1.193e-9■■■■■ 43.7
SF3B1-201ENST00000335508 GNG11P61952 73 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 RETREG2Q8NC44 543 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 KIF2CQ99661 725 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 ACAD9Q9H845 621 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 CCNE1P24864 410 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 SFNP31947 248 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 GMPSP49915 693 aaPredicted RBP7.62□□□□□ -1.19
SF3B1-201ENST00000335508 GRM1Q13255 1194 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 ISM2Q6H9L7 571 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 GIMAP8Q8ND71 665 aaPredicted RBP7.62□□□□□ -1.19
SF3B1-201ENST00000335508 NOC4LQ9BVI4 516 aaKnown RBP7.62□□□□□ -1.19
SF3B1-201ENST00000335508 WDR64B1ANS9 1081 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 CALUO43852 315 aaPredicted RBP7.62□□□□□ -1.19
SF3B1-201ENST00000335508 EIF3JO75822 258 aaKnown RBP7.62□□□□□ -1.19
SF3B1-201ENST00000335508 KCNV1Q6PIU1 500 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 FAM81BQ96LP2 452 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 SEL1LQ9UBV2 794 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 ZBTB21Q9ULJ3 1066 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 PAXBP1Q9Y5B6 917 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 CCDC169A6NNP5 214 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 CHMP2AO43633 222 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 LARGE1O95461 756 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 ACTN2P35609 894 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 PKP1Q13835 747 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 TPH2Q8IWU9 490 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 DEPTORQ8TB45 409 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 SYNRGQ9UMZ2 1314 aa7.62□□□□□ -1.19
SF3B1-201ENST00000335508 URI1O94763 535 aaPredicted RBP7.61□□□□□ -1.19
SF3B1-201ENST00000335508 XRCC5P13010 732 aaKnown RBP7.61□□□□□ -1.19
SF3B1-201ENST00000335508 FANCCQ00597 558 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 BIRC3Q13489 604 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 TEX35Q5T0J7 233 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 LUZP1Q86V48 1076 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 GPBP1Q86WP2 473 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 OR8K1Q8NGG5 319 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 RMDN3Q96TC7 470 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 SLC8A3P57103 927 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 MAP3K9P80192 1104 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 MAP9Q49MG5 647 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 SLC9C1Q4G0N8 1177 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 XKR9Q5GH70 373 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 WDR44Q5JSH3 913 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 SPECC1LQ69YQ0 1117 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 GADL1Q6ZQY3 521 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 ANKS1AQ92625 1134 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.61□□□□□ -1.19
SF3B1-201ENST00000335508 KIF13AQ9H1H9 1805 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 SIGLEC1Q9BZZ2 1709 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 GOLGA6L10A0A0M3HER8 536 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 JAK3P52333 1124 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 TUBB2AQ13885 445 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 DACT2Q5SW24 774 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 PPP4R3CPQ6ZMV5 832 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 ERO1BQ86YB8 467 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 CMTR1Q8N1G2 835 aaKnown RBP7.61□□□□□ -1.19
SF3B1-201ENST00000335508 TUBB2BQ9BVA1 445 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 HACL1Q9UJ83 578 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 FRMPD2Q68DX3 1309 aaPredicted RBP7.61□□□□□ -1.19
SF3B1-201ENST00000335508 XPOTO43592 962 aaKnown RBP7.61□□□□□ -1.19
SF3B1-201ENST00000335508 MYCNP04198 464 aaPredicted RBP7.61□□□□□ -1.19
SF3B1-201ENST00000335508 TNNT1P13805 278 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 ANTXR2P58335 489 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 ODR4Q5SWX8 454 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 MOXD1Q6UVY6 613 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 MIGA2Q7L4E1 593 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 NCAPG2Q86XI2 1143 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 MYCT1Q8N699 235 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 IGSF22Q8N9C0 903 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 M0QZ92 97 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 SNW1Q13573 536 aaKnown RBP7.61□□□□□ -1.19
SF3B1-201ENST00000335508 RNF207Q6ZRF8 634 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 KCTD1Q719H9 257 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 SMIM5Q71RC9 77 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 ZNF280CQ8ND82 737 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 GGA3Q9NZ52 723 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 AKR1B15C9JRZ8 316 aaPredicted RBP7.61□□□□□ -1.19
SF3B1-201ENST00000335508 SLC25A27O95847 323 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 SLC16A2P36021 539 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 YWHAEP62258 255 aaKnown RBP7.61□□□□□ -1.19
SF3B1-201ENST00000335508 COA7Q96BR5 231 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 MIS12Q9H081 205 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 ZMYND12Q9H0C1 365 aa7.61□□□□□ -1.19
SF3B1-201ENST00000335508 NEDD4P46934 1319 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 PLEKHA8P1O95397 391 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 UBXN1Q04323 297 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 STXBP2Q15833 593 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 DDX12PQ92771 950 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 IL17RAQ96F46 866 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 ZBTB12Q9Y330 459 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 NOP2P46087 812 aaKnown RBP7.6□□□□□ -1.19
SF3B1-201ENST00000335508 TFDP1Q14186 410 aa7.6□□□□□ -1.19
SF3B1-201ENST00000335508 MYOZ2Q9NPC6 264 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms