RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 SUPT20HL1Q3ZLR7 823 aa11.88□□□□□ -0.51
AP1S3-201ENST00000334271 SLFN13Q68D06 897 aa11.88□□□□□ -0.51
AP1S3-201ENST00000334271 DPY19L2Q6NUT2 758 aa11.88□□□□□ -0.51
AP1S3-201ENST00000334271 DRC7Q8IY82 874 aa11.88□□□□□ -0.51
AP1S3-201ENST00000334271 STAG2Q8N3U4 1231 aa11.88□□□□□ -0.51
AP1S3-201ENST00000334271 ZNF341Q9BYN7 854 aa11.88□□□□□ -0.51
AP1S3-201ENST00000334271 ZNF541Q9H0D2 1346 aa11.88□□□□□ -0.51
AP1S3-201ENST00000334271 FSD2A1L4K1 749 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 TRIM75PA6NK02 468 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 USP17L5A8MUK1 530 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 BTBD18B2RXH4 712 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 M0R2N6 131 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 ZBTB5O15062 677 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 CYTH3O43739 400 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 SLC1A4P43007 532 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 PTPAQ15257 358 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 ZSCAN23Q3MJ62 389 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 ARL6IP4Q66PJ3 421 aaKnown RBP11.87□□□□□ -0.51
AP1S3-201ENST00000334271 CCDC73Q6ZRK6 1079 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 FMNL3Q8IVF7 1028 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 CHURC1Q8WUH1 139 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 AIFM3Q96NN9 605 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 F5H6K3 240 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 GH2P01242 217 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 FAM160A1Q05DH4 1040 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 KLRC3Q07444 240 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 SEPT2Q15019 361 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 NPY5RQ15761 445 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 NOL9Q5SY16 702 aaKnown RBP11.87□□□□□ -0.51
AP1S3-201ENST00000334271 MFSD4BQ5TF39 518 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 CAVIN1Q6NZI2 390 aaKnown RBP11.87□□□□□ -0.51
AP1S3-201ENST00000334271 USP17L2Q6R6M4 530 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 LRSAM1Q6UWE0 723 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 RBM43Q6ZSC3 357 aaKnown RBP11.87□□□□□ -0.51
AP1S3-201ENST00000334271 USP50Q70EL3 339 aaPredicted RBP11.87□□□□□ -0.51
AP1S3-201ENST00000334271 MRPS27Q92552 414 aaKnown RBP11.87□□□□□ -0.51
AP1S3-201ENST00000334271 CCDC34Q96HJ3 373 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 AS3MTQ9HBK9 375 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 VPS54Q9P1Q0 977 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 TFIP11Q9UBB9 837 aaKnown RBP11.87□□□□□ -0.51
AP1S3-201ENST00000334271 USP25Q9UHP3 1055 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 HACL1Q9UJ83 578 aa11.87□□□□□ -0.51
AP1S3-201ENST00000334271 GOLGA6L3A6NEY3 463 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 PHF20L1A8MW92 1017 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 IPO5O00410 1097 aaKnown RBP11.86□□□□□ -0.51
AP1S3-201ENST00000334271 TIMM44O43615 452 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 FAM163BP0C2L3 166 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 BMP3P12645 472 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 CASQ1P31415 396 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 ME1P48163 572 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 MRE11P49959 708 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 USP14P54578 494 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 GJC2Q5T442 439 aaPredicted RBP11.86□□□□□ -0.51
AP1S3-201ENST00000334271 WWC2Q6AWC2 1192 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 SIAH1Q8IUQ4 282 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 WDR18Q9BV38 432 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 DEFB129Q9H1M3 183 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 PIF1Q9H611 641 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 VCPKMTQ9H867 229 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 GADD45BO75293 160 aaPredicted RBP11.86□□□□□ -0.51
AP1S3-201ENST00000334271 MRPL12P52815 198 aaKnown RBP11.86□□□□□ -0.51
AP1S3-201ENST00000334271 OTUD7BQ6GQQ9 843 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 CCDC70Q6NSX1 233 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 RPUSD2Q8IZ73 545 aaKnown RBP11.86□□□□□ -0.51
AP1S3-201ENST00000334271 LRRC47Q8N1G4 583 aaKnown RBP11.86□□□□□ -0.51
AP1S3-201ENST00000334271 PGBD1Q96JS3 809 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 TMEM39BQ9GZU3 492 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 KIAA1683Q9H0B3 1180 aa11.86□□□□□ -0.51
AP1S3-201ENST00000334271 SRPRBQ9Y5M8 271 aaKnown RBP11.86□□□□□ -0.51
AP1S3-201ENST00000334271 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.85□□□□□ -0.51
AP1S3-201ENST00000334271 SLC26A4O43511 780 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 PTPREP23469 700 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 PRPHP41219 470 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 NAPAP54920 295 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 IFT88Q13099 833 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 E2F5Q15329 346 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 CCDC144BQ3MJ40 725 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 ADGRF4Q8IZF3 695 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 CMTR1Q8N1G2 835 aaKnown RBP11.85□□□□□ -0.51
AP1S3-201ENST00000334271 VPS37AQ8NEZ2 397 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 CCDC47Q96A33 483 aaKnown RBP11.85□□□□□ -0.51
AP1S3-201ENST00000334271 DDX27Q96GQ7 796 aaKnown RBP11.85□□□□□ -0.51
AP1S3-201ENST00000334271 CLSTN2Q9H4D0 955 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 JMJD4Q9H9V9 463 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 GDPD2Q9HCC8 539 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 RIC8AQ9NPQ8 531 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 TMEM63CQ9P1W3 806 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 FEM1BQ9UK73 627 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 PCDHA7Q9UN72 937 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 KCNJ14Q9UNX9 436 aa11.85□□□□□ -0.51
AP1S3-201ENST00000334271 DHX8Q14562 1220 aaKnown RBP11.84□□□□□ -0.51
AP1S3-201ENST00000334271 FAM173BQ6P4H8 233 aa11.84□□□□□ -0.51
AP1S3-201ENST00000334271 EPAS1Q99814 870 aa11.84□□□□□ -0.51
AP1S3-201ENST00000334271 NUP62CLQ9H1M0 184 aa11.84□□□□□ -0.51
AP1S3-201ENST00000334271 RETREG1Q9H6L5 497 aa11.84□□□□□ -0.51
AP1S3-201ENST00000334271 HOOK1Q9UJC3 728 aaKnown RBP11.84□□□□□ -0.51
AP1S3-201ENST00000334271 CLIC4Q9Y696 253 aa11.84□□□□□ -0.51
AP1S3-201ENST00000334271 WDR90Q96KV7 1748 aa11.84□□□□□ -0.51
AP1S3-201ENST00000334271 IQCA1LA6NCM1 817 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms