RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ERGIC2Q96RQ1 377 aa26.27■■□□□ 1.8
TSKU-201ENST00000333090 OSBPL9Q96SU4 736 aa26.27■■□□□ 1.8
TSKU-201ENST00000333090 ARHGAP20Q9P2F6 1191 aa26.27■■□□□ 1.8
TSKU-201ENST00000333090 FAM169AQ9Y6X4 670 aa26.27■■□□□ 1.8
TSKU-201ENST00000333090 CPP00450 1065 aa26.27■■□□□ 1.8
TSKU-201ENST00000333090 DCP1AQ9NPI6 582 aaPredicted RBP26.27■■□□□ 1.8
TSKU-201ENST00000333090 FAM207AQ9NSI2 230 aaPredicted RBP26.27■■□□□ 1.8
TSKU-201ENST00000333090 GOLGA8KD6RF30 607 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 KCNQ2O43526 872 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 RCSD1Q6JBY9 416 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 RUFY1Q96T51 708 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 TRIM9Q9C026 710 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 PCDHA6Q9UN73 950 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 PCDHA8Q9Y5H6 950 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 CACNA1SQ13698 1873 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 A0A1W2PQJ5 194 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 SHTN1A0MZ66 631 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 EIF3HO15372 352 aaKnown RBP eCLIP26.26■■□□□ 1.79
TSKU-201ENST00000333090 KIF11P52732 1056 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 HPS3Q969F9 1004 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 PLAGL2Q9UPG8 496 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 MTMR7Q9Y216 660 aa26.26■■□□□ 1.79
TSKU-201ENST00000333090 NIP7Q9Y221 180 aaKnown RBP eCLIP26.26■■□□□ 1.79
TSKU-201ENST00000333090 MYH10P35580 1976 aa26.25■■□□□ 1.79
TSKU-201ENST00000333090 CAVIN4Q5BKX8 364 aa26.25■■□□□ 1.79
TSKU-201ENST00000333090 FIGNQ5HY92 759 aa26.25■■□□□ 1.79
TSKU-201ENST00000333090 TSEN2Q8NCE0 465 aaKnown RBP26.25■■□□□ 1.79
TSKU-201ENST00000333090 GRIN2DO15399 1336 aa26.25■■□□□ 1.79
TSKU-201ENST00000333090 NHSL1Q5SYE7 1610 aa26.25■■□□□ 1.79
TSKU-201ENST00000333090 EPHB6O15197 1021 aa26.25■■□□□ 1.79
TSKU-201ENST00000333090 OPA1O60313 960 aa26.25■■□□□ 1.79
TSKU-201ENST00000333090 ERLIN2O94905 339 aa26.25■■□□□ 1.79
TSKU-201ENST00000333090 GBP6Q6ZN66 633 aa26.25■■□□□ 1.79
TSKU-201ENST00000333090 CABP7Q86V35 215 aa26.25■■□□□ 1.79
TSKU-201ENST00000333090 ZSCAN29Q8IWY8 852 aaPredicted RBP26.25■■□□□ 1.79
TSKU-201ENST00000333090 STIM2Q9P246 746 aa26.25■■□□□ 1.79
TSKU-201ENST00000333090 AKR1B10O60218 316 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 EIF4A3P38919 411 aaKnown RBP26.24■■□□□ 1.79
TSKU-201ENST00000333090 EPHB4P54760 987 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 ITIH3Q06033 890 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 HEATR3Q7Z4Q2 680 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 ARL8AQ96BM9 186 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 ALS2CR12Q96Q35 445 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 SH3GL2Q99962 352 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 SH3GLB2Q9NR46 395 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 TCP11L1Q9NUJ3 509 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 HYOU1Q9Y4L1 999 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 TXNRD1Q16881 649 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 C3orf67Q6ZVT6 689 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 ANKRD13CQ8N6S4 541 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 DLEC1Q9Y238 1755 aa26.24■■□□□ 1.79
TSKU-201ENST00000333090 M0R2N6 131 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 NCK2O43639 380 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 TCP1P17987 556 aaKnown RBP26.23■■□□□ 1.79
TSKU-201ENST00000333090 HAUS3Q68CZ6 603 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 BICDL1Q6ZP65 573 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 ZNF572Q7Z3I7 529 aaPredicted RBP26.23■■□□□ 1.79
TSKU-201ENST00000333090 CRNKL1Q9BZJ0 848 aaKnown RBP26.23■■□□□ 1.79
TSKU-201ENST00000333090 MMRN2Q9H8L6 949 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 CCDC87Q9NVE4 849 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 COL4A1P02462 1669 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 PRLRP16471 622 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 SEMA3FQ13275 785 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 CCDC24Q8N4L8 307 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 PNMA1Q8ND90 353 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 NSUN4Q96CB9 384 aaKnown RBP26.23■■□□□ 1.79
TSKU-201ENST00000333090 SAMM50Q9Y512 469 aa26.23■■□□□ 1.79
TSKU-201ENST00000333090 FLT1P17948 1338 aa26.22■■□□□ 1.79
TSKU-201ENST00000333090 HSF2BPO75031 334 aa26.22■■□□□ 1.79
TSKU-201ENST00000333090 PARP10Q53GL7 1025 aa26.22■■□□□ 1.79
TSKU-201ENST00000333090 TTMPQ5BVD1 217 aa26.22■■□□□ 1.79
TSKU-201ENST00000333090 EMBQ6PCB8 327 aa26.22■■□□□ 1.79
TSKU-201ENST00000333090 MARCH10Q8NA82 808 aaPredicted RBP26.22■■□□□ 1.79
TSKU-201ENST00000333090 NTSR2O95665 410 aa26.22■■□□□ 1.79
TSKU-201ENST00000333090 PAFAH1B1P43034 410 aa26.22■■□□□ 1.79
TSKU-201ENST00000333090 MECOMQ03112 1051 aa26.22■■□□□ 1.79
TSKU-201ENST00000333090 C8orf74Q6P047 294 aa26.22■■□□□ 1.79
TSKU-201ENST00000333090 RUBCNQ92622 972 aa26.22■■□□□ 1.79
TSKU-201ENST00000333090 SLC39A2Q9NP94 309 aa26.22■■□□□ 1.79
TSKU-201ENST00000333090 LOC102724428A0A0B4J2F2 783 aa26.21■■□□□ 1.79
TSKU-201ENST00000333090 ERCC3P19447 782 aa26.21■■□□□ 1.79
TSKU-201ENST00000333090 SIK1P57059 783 aa26.21■■□□□ 1.79
TSKU-201ENST00000333090 DDB1Q16531 1140 aa26.21■■□□□ 1.79
TSKU-201ENST00000333090 FAM84BQ96KN1 310 aaPredicted RBP26.21■■□□□ 1.79
TSKU-201ENST00000333090 DNAJC5Q9H3Z4 198 aa26.21■■□□□ 1.79
TSKU-201ENST00000333090 CUEDC2Q9H467 287 aa26.21■■□□□ 1.79
TSKU-201ENST00000333090 CAMTA2O94983 1202 aa26.21■■□□□ 1.79
TSKU-201ENST00000333090 HNRNPH3P31942 346 aaKnown RBP26.21■■□□□ 1.79
TSKU-201ENST00000333090 MMS22LQ6ZRQ5 1243 aa26.21■■□□□ 1.79
TSKU-201ENST00000333090 RRAGAQ7L523 313 aa26.21■■□□□ 1.79
TSKU-201ENST00000333090 KAT2BQ92831 832 aa26.21■■□□□ 1.79
TSKU-201ENST00000333090 GUCY2CP25092 1073 aa26.2■■□□□ 1.79
TSKU-201ENST00000333090 TFAP4Q01664 338 aa26.2■■□□□ 1.79
TSKU-201ENST00000333090 PDCLQ13371 301 aa26.2■■□□□ 1.79
TSKU-201ENST00000333090 KIAA0895Q8NCT3 520 aa26.2■■□□□ 1.79
TSKU-201ENST00000333090 NDST4Q9H3R1 872 aa26.2■■□□□ 1.79
TSKU-201ENST00000333090 SEMA6BQ9H3T3 888 aa26.2■■□□□ 1.79
TSKU-201ENST00000333090 RBM12Q9NTZ6 932 aaKnown RBP26.2■■□□□ 1.79
TSKU-201ENST00000333090 SALL4Q9UJQ4 1053 aa26.2■■□□□ 1.79
TSKU-201ENST00000333090 MAGEA1P43355 309 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms