RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 VSTM4Q8IW00 320 aa17.9■□□□□ 0.46
PGBD2-201ENST00000329291 GMCL1Q96IK5 515 aa17.9■□□□□ 0.46
PGBD2-201ENST00000329291 MAPK8IP1Q9UQF2 711 aa17.9■□□□□ 0.46
PGBD2-201ENST00000329291 GDAQ9Y2T3 454 aa17.9■□□□□ 0.46
PGBD2-201ENST00000329291 LTBP3Q9NS15 1303 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 KLRC4O43908 158 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 CDK11BP21127 795 aaKnown RBP17.89■□□□□ 0.45
PGBD2-201ENST00000329291 PTGER2P43116 358 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 GOLGA8FQ08AF8 430 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 GOLGA8DPQ0D2H9 430 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 DNTTIP2Q5QJE6 756 aaKnown RBP17.89■□□□□ 0.45
PGBD2-201ENST00000329291 SPATA1Q5VX52 437 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 APTXQ7Z2E3 356 aaKnown RBP17.89■□□□□ 0.45
PGBD2-201ENST00000329291 USP27XA6NNY8 438 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 CBFA2T2O43439 604 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 GSDMDP57764 484 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 CT47A1Q5JQC4 288 aaPredicted RBP17.89■□□□□ 0.45
PGBD2-201ENST00000329291 ZBED3Q96IU2 234 aaPredicted RBP17.89■□□□□ 0.45
PGBD2-201ENST00000329291 UIMC1Q96RL1 719 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.89■□□□□ 0.45
PGBD2-201ENST00000329291 PGAP2Q9UHJ9 254 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 CTNND2Q9UQB3 1225 aa17.89■□□□□ 0.45
PGBD2-201ENST00000329291 MEIS2O14770 477 aa17.88■□□□□ 0.45
PGBD2-201ENST00000329291 BMP3P12645 472 aa17.88■□□□□ 0.45
PGBD2-201ENST00000329291 RPS12P25398 132 aaKnown RBP17.88■□□□□ 0.45
PGBD2-201ENST00000329291 ORC2Q13416 577 aaPredicted RBP17.88■□□□□ 0.45
PGBD2-201ENST00000329291 ZNF658Q5TYW1 1059 aaPredicted RBP17.88■□□□□ 0.45
PGBD2-201ENST00000329291 FAM83AQ86UY5 434 aa17.88■□□□□ 0.45
PGBD2-201ENST00000329291 HAS1Q92839 578 aa17.88■□□□□ 0.45
PGBD2-201ENST00000329291 NUDT12Q9BQG2 462 aa17.88■□□□□ 0.45
PGBD2-201ENST00000329291 MYOZ2Q9NPC6 264 aa17.88■□□□□ 0.45
PGBD2-201ENST00000329291 SYNRGQ9UMZ2 1314 aa17.88■□□□□ 0.45
PGBD2-201ENST00000329291 EGFRP00533 1210 aa17.87■□□□□ 0.45
PGBD2-201ENST00000329291 PRCPP42785 496 aa17.87■□□□□ 0.45
PGBD2-201ENST00000329291 KMT5BQ4FZB7 885 aa17.87■□□□□ 0.45
PGBD2-201ENST00000329291 SYDE2Q5VT97 1194 aa17.87■□□□□ 0.45
PGBD2-201ENST00000329291 PPP4R3AQ6IN85 833 aa17.87■□□□□ 0.45
PGBD2-201ENST00000329291 POTEMA6NI47 508 aa17.87■□□□□ 0.45
PGBD2-201ENST00000329291 WNT10BO00744 389 aa17.87■□□□□ 0.45
PGBD2-201ENST00000329291 FXR2P51116 673 aaKnown RBP eCLIP17.87■□□□□ 0.45
PGBD2-201ENST00000329291 GRB10Q13322 594 aa17.87■□□□□ 0.45
PGBD2-201ENST00000329291 CDKAL1Q5VV42 579 aa17.87■□□□□ 0.45
PGBD2-201ENST00000329291 LRWD1Q9UFC0 647 aa17.87■□□□□ 0.45
PGBD2-201ENST00000329291 IKQ13123 557 aaPredicted RBP17.86■□□□□ 0.45
PGBD2-201ENST00000329291 NR1I3Q14994 352 aa17.86■□□□□ 0.45
PGBD2-201ENST00000329291 USH1GQ495M9 461 aa17.86■□□□□ 0.45
PGBD2-201ENST00000329291 PNMA5Q96PV4 448 aa17.86■□□□□ 0.45
PGBD2-201ENST00000329291 DDX25Q9UHL0 483 aaKnown RBP17.86■□□□□ 0.45
PGBD2-201ENST00000329291 TEX33O43247 280 aa17.86■□□□□ 0.45
PGBD2-201ENST00000329291 RASSF7Q02833 373 aa17.86■□□□□ 0.45
PGBD2-201ENST00000329291 BTNL9Q6UXG8 535 aa17.86■□□□□ 0.45
PGBD2-201ENST00000329291 ZBTB21Q9ULJ3 1066 aa17.86■□□□□ 0.45
PGBD2-201ENST00000329291 OPLAHO14841 1288 aa17.85■□□□□ 0.45
PGBD2-201ENST00000329291 ZNF280AP59817 542 aaPredicted RBP17.85■□□□□ 0.45
PGBD2-201ENST00000329291 TBX2Q13207 712 aaPredicted RBP17.85■□□□□ 0.45
PGBD2-201ENST00000329291 DHX8Q14562 1220 aaKnown RBP17.85■□□□□ 0.45
PGBD2-201ENST00000329291 CCDC84Q86UT8 332 aaPredicted RBP17.85■□□□□ 0.45
PGBD2-201ENST00000329291 NELFBQ8WX92 580 aa17.85■□□□□ 0.45
PGBD2-201ENST00000329291 AMNQ9BXJ7 453 aa17.85■□□□□ 0.45
PGBD2-201ENST00000329291 GLIS2Q9BZE0 524 aaPredicted RBP17.85■□□□□ 0.45
PGBD2-201ENST00000329291 BLOC1S4Q9NUP1 217 aa17.85■□□□□ 0.45
PGBD2-201ENST00000329291 RMND1Q9NWS8 449 aa17.85■□□□□ 0.45
PGBD2-201ENST00000329291 PRR12Q9ULL5 1215 aa17.85■□□□□ 0.45
PGBD2-201ENST00000329291 TMX2Q9Y320 296 aa17.85■□□□□ 0.45
PGBD2-201ENST00000329291 A0A1B0GTH6 734 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 TBC1D12O60347 775 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 SFPQP23246 707 aaKnown RBP eCLIP17.84■□□□□ 0.45
PGBD2-201ENST00000329291 PDIA5Q14554 519 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 ECM1Q16610 540 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 FBXO11Q86XK2 927 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 CCDC150Q8NCX0 1101 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 TRIM9Q9C026 710 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 RWDD2AQ9UIY3 292 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 SYNPO2Q9UMS6 1093 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 PRELPP51888 382 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 PMS1P54277 932 aaKnown RBP17.84■□□□□ 0.45
PGBD2-201ENST00000329291 KCNB1Q14721 858 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 FAM83BQ5T0W9 1011 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 ADSSL1Q8N142 457 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 NLGN2Q8NFZ4 835 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 C16orf45Q96MC5 204 aaPredicted RBP17.84■□□□□ 0.45
PGBD2-201ENST00000329291 CUEDC2Q9H467 287 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 ARHGEF10LQ9HCE6 1279 aa17.84■□□□□ 0.45
PGBD2-201ENST00000329291 TRMT1Q9NXH9 659 aaKnown RBP17.84■□□□□ 0.45
PGBD2-201ENST00000329291 RHOBTB3O94955 611 aa17.83■□□□□ 0.45
PGBD2-201ENST00000329291 PAK1Q13153 545 aa17.83■□□□□ 0.45
PGBD2-201ENST00000329291 ZYXQ15942 572 aaKnown RBP17.83■□□□□ 0.45
PGBD2-201ENST00000329291 KCNK18Q7Z418 384 aa17.83■□□□□ 0.45
PGBD2-201ENST00000329291 CRYGNQ8WXF5 182 aa17.83■□□□□ 0.45
PGBD2-201ENST00000329291 C7orf25Q9BPX7 421 aa17.83■□□□□ 0.45
PGBD2-201ENST00000329291 ANO3Q9BYT9 981 aa17.83■□□□□ 0.45
PGBD2-201ENST00000329291 MYH7BA7E2Y1 1941 aa17.83■□□□□ 0.44
PGBD2-201ENST00000329291 TRIM49BA6NDI0 452 aa17.83■□□□□ 0.44
PGBD2-201ENST00000329291 TNFAIP1Q13829 316 aa17.83■□□□□ 0.44
PGBD2-201ENST00000329291 MCM6Q14566 821 aa17.83■□□□□ 0.44
PGBD2-201ENST00000329291 TPD52L1Q16890 204 aaPredicted RBP17.83■□□□□ 0.44
PGBD2-201ENST00000329291 HPS3Q969F9 1004 aa17.83■□□□□ 0.44
PGBD2-201ENST00000329291 CALML4Q96GE6 196 aa17.83■□□□□ 0.44
PGBD2-201ENST00000329291 ADD3Q9UEY8 706 aaKnown RBP17.83■□□□□ 0.44
PGBD2-201ENST00000329291 GJA3Q9Y6H8 435 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms