RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.33■■□□□ 1.49
TNFRSF18-201ENST00000328596 CCDC69A6NI79 296 aa24.33■■□□□ 1.49
TNFRSF18-201ENST00000328596 GJA9P57773 515 aa24.33■■□□□ 1.49
TNFRSF18-201ENST00000328596 TAPT1Q6NXT6 567 aa24.33■■□□□ 1.49
TNFRSF18-201ENST00000328596 CTCFLQ8NI51 663 aaPredicted RBP24.33■■□□□ 1.49
TNFRSF18-201ENST00000328596 NEK1Q96PY6 1258 aa24.33■■□□□ 1.49
TNFRSF18-201ENST00000328596 MPHOSPH6Q99547 160 aaKnown RBP24.33■■□□□ 1.49
TNFRSF18-201ENST00000328596 MYL10Q9BUA6 226 aa24.33■■□□□ 1.49
TNFRSF18-201ENST00000328596 UPF3AQ9H1J1 476 aaKnown RBP24.33■■□□□ 1.49
TNFRSF18-201ENST00000328596 LRRC37A2A6NM11 1700 aa24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 CYTH3O43739 400 aa24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 PPP1R11O60927 126 aaPredicted RBP24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 C6orf222P0C671 652 aaPredicted RBP24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 CST5P28325 142 aaPredicted RBP24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 KIF5BP33176 963 aa24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 RTP1P59025 263 aa24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 HABP4Q5JVS0 413 aaKnown RBP24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 IQSEC1Q6DN90 963 aa24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 CCSAPQ6IQ19 270 aaPredicted RBP24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 HOMER1Q86YM7 354 aa24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 RASEFQ8IZ41 740 aa24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 TBC1D5Q92609 795 aa24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 PIGSQ96S52 555 aa24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 PDGFCQ9NRA1 345 aa24.32■■□□□ 1.48
TNFRSF18-201ENST00000328596 MYADML2A6NDP7 307 aa24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 MOXD2PA6NHM9 499 aa24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 B4DLN1 442 aa24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 SYN1P17600 705 aa24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 EDNRBP24530 442 aa24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 MRPL12P52815 198 aaKnown RBP24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 TRAF1Q13077 416 aa24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 KRT32Q14532 448 aa24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 SNX17Q15036 470 aa24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 C1orf53Q5VUE5 145 aa24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 NOL8Q76FK4 1167 aaKnown RBP24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 SYTL5Q8TDW5 730 aaPredicted RBP24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 LRRC2Q9BYS8 371 aa24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 BAZ2BQ9UIF8 2168 aaKnown RBP24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 GNEQ9Y223 722 aaKnown RBP24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 PCDHA1Q9Y5I3 950 aa24.31■■□□□ 1.48
TNFRSF18-201ENST00000328596 A0A1W2PQ45 241 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF18-201ENST00000328596 A0A1W2PQY0 241 aa24.3■■□□□ 1.48
TNFRSF18-201ENST00000328596 SMPD1P17405 629 aa24.3■■□□□ 1.48
TNFRSF18-201ENST00000328596 ACLYP53396 1101 aa24.3■■□□□ 1.48
TNFRSF18-201ENST00000328596 NKX3-2P78367 333 aa24.3■■□□□ 1.48
TNFRSF18-201ENST00000328596 PDE4DQ08499 809 aa24.3■■□□□ 1.48
TNFRSF18-201ENST00000328596 KCNA10Q16322 511 aa24.3■■□□□ 1.48
TNFRSF18-201ENST00000328596 PCSK9Q8NBP7 692 aaKnown RBP24.3■■□□□ 1.48
TNFRSF18-201ENST00000328596 PRO3102Q9H379 93 aa24.3■■□□□ 1.48
TNFRSF18-201ENST00000328596 ATP11BQ9Y2G3 1177 aa24.3■■□□□ 1.48
TNFRSF18-201ENST00000328596 SLC12A7Q9Y666 1083 aa24.3■■□□□ 1.48
TNFRSF18-201ENST00000328596 PNMA6FA0A0J9YX94 578 aa24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 CALM1P0DP23 149 aa24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 CALM2P0DP24 149 aa24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 CALM3P0DP25 149 aa24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 SMARCA1P28370 1054 aa24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 IRX5P78411 483 aaPredicted RBP24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 ADCK5Q3MIX3 580 aa24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 DHX32Q7L7V1 743 aaKnown RBP24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 TAAR1Q96RJ0 339 aa24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 LZTS2Q9BRK4 669 aa24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 SPZ1Q9BXG8 430 aa24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 COL20A1Q9P218 1284 aa24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 RBM27Q9P2N5 1060 aaKnown RBP24.29■■□□□ 1.48
TNFRSF18-201ENST00000328596 OPLAHO14841 1288 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 CTAGE5O15320 804 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 REC8O95072 547 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 CFBP00751 764 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 GNAQP50148 359 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 EXOSC10Q01780 885 aaKnown RBP24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 GHRHRQ02643 423 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 TRIM60Q495X7 471 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 GNASQ5JWF2 1037 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 TLK2Q86UE8 772 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 SGMS1Q86VZ5 419 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 NSUN6Q8TEA1 469 aaKnown RBP24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 KCNB2Q92953 911 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 MAP3K20Q9NYL2 800 aaKnown RBP24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 Q9Y3F1 56 aa24.28■■□□□ 1.48
TNFRSF18-201ENST00000328596 RBM47A0AV96 593 aaKnown RBP24.27■■□□□ 1.48
TNFRSF18-201ENST00000328596 HSPA4P34932 840 aa24.27■■□□□ 1.48
TNFRSF18-201ENST00000328596 HSD17B4P51659 736 aa24.27■■□□□ 1.48
TNFRSF18-201ENST00000328596 SAMD3Q8N6K7 520 aa24.27■■□□□ 1.48
TNFRSF18-201ENST00000328596 RMDN3Q96TC7 470 aa24.27■■□□□ 1.48
TNFRSF18-201ENST00000328596 AP5M1Q9H0R1 490 aa24.27■■□□□ 1.48
TNFRSF18-201ENST00000328596 STARD7Q9NQZ5 370 aa24.27■■□□□ 1.48
TNFRSF18-201ENST00000328596 DYNC1LI2O43237 492 aaPredicted RBP24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 ASGR1P07306 291 aa24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 HMGB1P09429 215 aaKnown RBP24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 RXRAP19793 462 aa24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 DUSP28Q4G0W2 176 aa24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 PIBF1Q8WXW3 757 aa24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 RRP36Q96EU6 259 aaKnown RBP24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 GLT1D1Q96MS3 346 aa24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 IWS1Q96ST2 819 aa24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 GDF15Q99988 308 aa24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 WDR11Q9BZH6 1224 aa24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 GTF3C3Q9Y5Q9 886 aa24.26■■□□□ 1.47
TNFRSF18-201ENST00000328596 RANBP2P49792 3224 aaKnown RBP24.25■■□□□ 1.47
TNFRSF18-201ENST00000328596 PLEKHA8P1O95397 391 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms