RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 PDE11AQ9HCR9 933 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 TCP10L2B9ZVM9 353 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 ABCB4P21439 1286 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 CCDC50Q8IVM0 306 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 PPEF1O14829 653 aaPredicted RBP15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 KRT5P13647 590 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 PRCPP42785 496 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 FKBP3Q00688 224 aaKnown RBP15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 RASSF7Q02833 373 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 MICALL1Q8N3F8 863 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 FUCA2Q9BTY2 467 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 AMNQ9BXJ7 453 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 CTTNBP2NLQ9P2B4 639 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 HYOU1Q9Y4L1 999 aa15.22■□□□□ 0.03
DNMT3B-202ENST00000328111 SELENOSQ9BQE4 189 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 SYNCQ9H7C4 482 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 STAT1P42224 750 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 NKX1-1Q15270 411 aaPredicted RBP15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 ABCB5Q2M3G0 1257 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 STAG2Q8N3U4 1231 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 U2AF1L4Q8WU68 220 aaKnown RBP15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 ARHGEF1Q92888 912 aaKnown RBP15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 ZNF512BQ96KM6 892 aaPredicted RBP15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 CD209Q9NNX6 404 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 KDM6AO15550 1401 aaPredicted RBP15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 AP5Z1O43299 807 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 GDF11O95390 407 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 TCP1P17987 556 aaKnown RBP15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 SMTNP53814 917 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 CCZ1BP86790 482 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 CCZ1P86791 482 aaPredicted RBP15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 DAAM2Q86T65 1068 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 SLFN12Q8IYM2 578 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 CHURC1Q8WUH1 139 aa15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 NSUN4Q96CB9 384 aaKnown RBP15.21■□□□□ 0.03
DNMT3B-202ENST00000328111 NDUFAB1O14561 156 aa15.21■□□□□ 0.02
DNMT3B-202ENST00000328111 KCNK3O14649 394 aa15.21■□□□□ 0.02
DNMT3B-202ENST00000328111 CAMTA2O94983 1202 aa15.21■□□□□ 0.02
DNMT3B-202ENST00000328111 MYL1P05976 194 aa15.21■□□□□ 0.02
DNMT3B-202ENST00000328111 E4F1Q66K89 784 aaPredicted RBP15.21■□□□□ 0.02
DNMT3B-202ENST00000328111 FMNL3Q8IVF7 1028 aa15.21■□□□□ 0.02
DNMT3B-202ENST00000328111 NR2F2P24468 414 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 CASP7P55210 303 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 GRIN1Q05586 938 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 OTUD6BQ8N6M0 293 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 FNBP1Q96RU3 617 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 MTUS1Q9ULD2 1270 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 MROH7-TTC4A0A0A0MT08 1334 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 MEIS1O00470 390 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 GUCY2FP51841 1108 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 ZBED6P86452 979 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 FMR1Q06787 632 aaKnown RBP eCLIP15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 PAK2Q13177 524 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 PPP1R7Q15435 360 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 MAN2A1Q16706 1144 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 GSTA5Q7RTV2 222 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 CPLX4Q7Z7G2 160 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 FAM178BQ8IXR5 827 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 RETREG2Q8NC44 543 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 MYO1AQ9UBC5 1043 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 STK17AQ9UEE5 414 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 MTRF1LQ9UGC7 380 aaKnown RBP15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 TSKSQ9UJT2 592 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 GJA3Q9Y6H8 435 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 USP17L5A8MUK1 530 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 CACNB3P54284 484 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 UBXN2AP68543 259 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 CALCOCO2Q13137 446 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 EPC1Q9H2F5 836 aa15.2■□□□□ 0.02
DNMT3B-202ENST00000328111 CXCR5P32302 372 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 MNAT1P51948 309 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 EHHADHQ08426 723 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 ZSCAN26Q16670 478 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 CEP95Q96GE4 821 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 PAIP2Q9BPZ3 127 aaKnown RBP15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 COL4A3BPQ9Y5P4 624 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 STK24Q9Y6E0 443 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 COL9A3Q14050 684 aaPredicted RBP15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 MTF1Q14872 753 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 MB21D1Q8N884 522 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 BAZ2BQ9UIF8 2168 aaKnown RBP15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 SEL1L2Q5TEA6 688 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 CCDC151A5D8V7 595 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 POTEMA6NI47 508 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 TXNRD1Q16881 649 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 GBP6Q6ZN66 633 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 THAP9Q9H5L6 903 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 KANSL2Q9H9L4 492 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 SWAP70Q9UH65 585 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 TUBE1Q9UJT0 475 aa15.19■□□□□ 0.02
DNMT3B-202ENST00000328111 A0A1W2PRG0 241 aa15.18■□□□□ 0.02
DNMT3B-202ENST00000328111 CLRN2A0PK11 232 aa15.18■□□□□ 0.02
DNMT3B-202ENST00000328111 ITPK1Q13572 414 aa15.18■□□□□ 0.02
DNMT3B-202ENST00000328111 EXOC3L4Q17RC7 722 aa15.18■□□□□ 0.02
DNMT3B-202ENST00000328111 CSRNP1Q96S65 589 aa15.18■□□□□ 0.02
DNMT3B-202ENST00000328111 NAP1L3Q99457 506 aaPredicted RBP15.18■□□□□ 0.02
DNMT3B-202ENST00000328111 IRX2Q9BZI1 471 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms