RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 VPS33BQ9H267 617 aa22.63■■□□□ 1.21
PDZD3-201ENST00000322712 HDAC9Q9UKV0 1011 aa22.63■■□□□ 1.21
PDZD3-201ENST00000322712 IKQ13123 557 aaPredicted RBP22.63■■□□□ 1.21
PDZD3-201ENST00000322712 SPDYE2Q495Y8 402 aa22.63■■□□□ 1.21
PDZD3-201ENST00000322712 KIAA1755Q5JYT7 1200 aa22.63■■□□□ 1.21
PDZD3-201ENST00000322712 PPP1R18Q6NYC8 613 aa22.63■■□□□ 1.21
PDZD3-201ENST00000322712 MYH7BA7E2Y1 1941 aa22.63■■□□□ 1.21
PDZD3-201ENST00000322712 NFKBIEO00221 500 aa22.62■■□□□ 1.21
PDZD3-201ENST00000322712 GSDMDP57764 484 aa22.62■■□□□ 1.21
PDZD3-201ENST00000322712 ACER1Q8TDN7 264 aa22.62■■□□□ 1.21
PDZD3-201ENST00000322712 MRPL12P52815 198 aaKnown RBP22.62■■□□□ 1.21
PDZD3-201ENST00000322712 NBPF9Q3BBW0 867 aa22.62■■□□□ 1.21
PDZD3-201ENST00000322712 USH1GQ495M9 461 aa22.62■■□□□ 1.21
PDZD3-201ENST00000322712 VSTM4Q8IW00 320 aa22.62■■□□□ 1.21
PDZD3-201ENST00000322712 IGSF22Q8N9C0 903 aa22.62■■□□□ 1.21
PDZD3-201ENST00000322712 GMCL1P1Q8NEA9 526 aa22.62■■□□□ 1.21
PDZD3-201ENST00000322712 FAM151AQ8WW52 585 aa22.62■■□□□ 1.21
PDZD3-201ENST00000322712 KBTBD4Q9NVX7 518 aa22.62■■□□□ 1.21
PDZD3-201ENST00000322712 POTEMA6NI47 508 aa22.61■■□□□ 1.21
PDZD3-201ENST00000322712 DYNC1I1O14576 645 aa22.61■■□□□ 1.21
PDZD3-201ENST00000322712 CBFA2T2O43439 604 aa22.61■■□□□ 1.21
PDZD3-201ENST00000322712 SPATA1Q5VX52 437 aa22.61■■□□□ 1.21
PDZD3-201ENST00000322712 AK8Q96MA6 479 aa22.61■■□□□ 1.21
PDZD3-201ENST00000322712 C16orf45Q96MC5 204 aaPredicted RBP22.61■■□□□ 1.21
PDZD3-201ENST00000322712 P2RX7Q99572 595 aaKnown RBP22.61■■□□□ 1.21
PDZD3-201ENST00000322712 DHX8Q14562 1220 aaKnown RBP22.61■■□□□ 1.21
PDZD3-201ENST00000322712 JDP2Q8WYK2 163 aa22.61■■□□□ 1.21
PDZD3-201ENST00000322712 SPON1Q9HCB6 807 aa22.61■■□□□ 1.21
PDZD3-201ENST00000322712 HERC5Q9UII4 1024 aaKnown RBP22.61■■□□□ 1.21
PDZD3-201ENST00000322712 SMCHD1A6NHR9 2005 aa22.6■■□□□ 1.21
PDZD3-201ENST00000322712 ARFGEF1Q9Y6D6 1849 aa22.6■■□□□ 1.21
PDZD3-201ENST00000322712 GMCL1Q96IK5 515 aa22.6■■□□□ 1.21
PDZD3-201ENST00000322712 MYO1BO43795 1136 aa22.59■■□□□ 1.21
PDZD3-201ENST00000322712 SFPQP23246 707 aaKnown RBP eCLIP22.59■■□□□ 1.21
PDZD3-201ENST00000322712 PRCPP42785 496 aa22.59■■□□□ 1.21
PDZD3-201ENST00000322712 KMT5BQ4FZB7 885 aa22.59■■□□□ 1.21
PDZD3-201ENST00000322712 ZNF658Q5TYW1 1059 aaPredicted RBP22.59■■□□□ 1.21
PDZD3-201ENST00000322712 APTXQ7Z2E3 356 aaKnown RBP22.59■■□□□ 1.21
PDZD3-201ENST00000322712 MAP7D2Q96T17 732 aa22.59■■□□□ 1.21
PDZD3-201ENST00000322712 NUDT12Q9BQG2 462 aa22.59■■□□□ 1.21
PDZD3-201ENST00000322712 TRMT1Q9NXH9 659 aaKnown RBP22.59■■□□□ 1.21
PDZD3-201ENST00000322712 COL2A1P02458 1487 aaPredicted RBP22.59■■□□□ 1.21
PDZD3-201ENST00000322712 KLRC4O43908 158 aa22.59■■□□□ 1.21
PDZD3-201ENST00000322712 EGFRP00533 1210 aa22.59■■□□□ 1.21
PDZD3-201ENST00000322712 BMP3P12645 472 aa22.59■■□□□ 1.21
PDZD3-201ENST00000322712 LRWD1Q9UFC0 647 aa22.59■■□□□ 1.21
PDZD3-201ENST00000322712 DDX25Q9UHL0 483 aaKnown RBP22.59■■□□□ 1.21
PDZD3-201ENST00000322712 WNT10BO00744 389 aa22.58■■□□□ 1.21
PDZD3-201ENST00000322712 RASSF7Q02833 373 aa22.58■■□□□ 1.21
PDZD3-201ENST00000322712 CCDC84Q86UT8 332 aaPredicted RBP22.58■■□□□ 1.21
PDZD3-201ENST00000322712 HAS1Q92839 578 aa22.58■■□□□ 1.21
PDZD3-201ENST00000322712 ZYXQ15942 572 aaKnown RBP22.58■■□□□ 1.2
PDZD3-201ENST00000322712 SYDE2Q5VT97 1194 aa22.58■■□□□ 1.2
PDZD3-201ENST00000322712 CCDC150Q8NCX0 1101 aa22.58■■□□□ 1.2
PDZD3-201ENST00000322712 MEIS2O14770 477 aa22.57■■□□□ 1.2
PDZD3-201ENST00000322712 TEX33O43247 280 aa22.57■■□□□ 1.2
PDZD3-201ENST00000322712 TPD52L1Q16890 204 aaPredicted RBP22.57■■□□□ 1.2
PDZD3-201ENST00000322712 CDKAL1Q5VV42 579 aa22.57■■□□□ 1.2
PDZD3-201ENST00000322712 AGBL3Q8NEM8 1001 aa22.57■■□□□ 1.2
PDZD3-201ENST00000322712 NELFBQ8WX92 580 aa22.57■■□□□ 1.2
PDZD3-201ENST00000322712 FXR2P51116 673 aaKnown RBP eCLIP22.57■■□□□ 1.2
PDZD3-201ENST00000322712 GRB10Q13322 594 aa22.57■■□□□ 1.2
PDZD3-201ENST00000322712 ORC2Q13416 577 aaPredicted RBP22.57■■□□□ 1.2
PDZD3-201ENST00000322712 CT47A1Q5JQC4 288 aaPredicted RBP22.57■■□□□ 1.2
PDZD3-201ENST00000322712 PPP4R3AQ6IN85 833 aa22.57■■□□□ 1.2
PDZD3-201ENST00000322712 RMND1Q9NWS8 449 aa22.57■■□□□ 1.2
PDZD3-201ENST00000322712 ZBTB21Q9ULJ3 1066 aa22.57■■□□□ 1.2
PDZD3-201ENST00000322712 TRIM49BA6NDI0 452 aa22.56■■□□□ 1.2
PDZD3-201ENST00000322712 PMS1P54277 932 aaKnown RBP22.56■■□□□ 1.2
PDZD3-201ENST00000322712 PAK1Q13153 545 aa22.56■■□□□ 1.2
PDZD3-201ENST00000322712 NR1I3Q14994 352 aa22.56■■□□□ 1.2
PDZD3-201ENST00000322712 PNMA5Q96PV4 448 aa22.56■■□□□ 1.2
PDZD3-201ENST00000322712 AMNQ9BXJ7 453 aa22.56■■□□□ 1.2
PDZD3-201ENST00000322712 GLIS2Q9BZE0 524 aaPredicted RBP22.56■■□□□ 1.2
PDZD3-201ENST00000322712 FBXO11Q86XK2 927 aa22.55■■□□□ 1.2
PDZD3-201ENST00000322712 HPS3Q969F9 1004 aa22.55■■□□□ 1.2
PDZD3-201ENST00000322712 RWDD2AQ9UIY3 292 aa22.55■■□□□ 1.2
PDZD3-201ENST00000322712 PRR12Q9ULL5 1215 aa22.55■■□□□ 1.2
PDZD3-201ENST00000322712 FAM83BQ5T0W9 1011 aa22.55■■□□□ 1.2
PDZD3-201ENST00000322712 CIAPIN1Q6FI81 312 aa22.55■■□□□ 1.2
PDZD3-201ENST00000322712 ANO3Q9BYT9 981 aa22.55■■□□□ 1.2
PDZD3-201ENST00000322712 TRIM9Q9C026 710 aa22.55■■□□□ 1.2
PDZD3-201ENST00000322712 BLOC1S4Q9NUP1 217 aa22.55■■□□□ 1.2
PDZD3-201ENST00000322712 A0A1B0GTH6 734 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 OPLAHO14841 1288 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 ECM1Q16610 540 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 SAMD1Q6SPF0 538 aaPredicted RBP22.54■■□□□ 1.2
PDZD3-201ENST00000322712 CREBRFQ8IUR6 639 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 CALML4Q96GE6 196 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 MYOZ2Q9NPC6 264 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 HOXA13P31271 388 aaPredicted RBP22.54■■□□□ 1.2
PDZD3-201ENST00000322712 MCM6Q14566 821 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 TMEM266Q2M3C6 531 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 KCNK18Q7Z418 384 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 ADSSL1Q8N142 457 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 MTMR14Q8NCE2 650 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 ZBED3Q96IU2 234 aaPredicted RBP22.54■■□□□ 1.2
PDZD3-201ENST00000322712 ARHGEF10LQ9HCE6 1279 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 PGAP2Q9UHJ9 254 aa22.54■■□□□ 1.2
PDZD3-201ENST00000322712 TMX2Q9Y320 296 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms