RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 FXR2P51116 673 aaKnown RBP eCLIP20.69■□□□□ 0.9
CCDC43-201ENST00000315286 PTPN21Q16825 1174 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 KIAA1755Q5JYT7 1200 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 FAM83AQ86UY5 434 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 CCDC125Q86Z20 511 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 AMNQ9BXJ7 453 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 GLT8D2Q9H1C3 349 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 ZBTB21Q9ULJ3 1066 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 SYNPO2Q9UMS6 1093 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 NFKBIEO00221 500 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 BTNL9Q6UXG8 535 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 VSTM4Q8IW00 320 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 CUEDC2Q9H467 287 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 ARHGEF10LQ9HCE6 1279 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 DDX25Q9UHL0 483 aaKnown RBP20.69■□□□□ 0.9
CCDC43-201ENST00000315286 CTNND2Q9UQB3 1225 aa20.69■□□□□ 0.9
CCDC43-201ENST00000315286 TBC1D12O60347 775 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 FBXO11Q86XK2 927 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 MYOZ2Q9NPC6 264 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 LRWD1Q9UFC0 647 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 PGAP2Q9UHJ9 254 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 GDAQ9Y2T3 454 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 TMX2Q9Y320 296 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 MEIS2O14770 477 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 KLRC4O43908 158 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 COBLO75128 1261 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 MYL1P05976 194 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 CCDC150Q8NCX0 1101 aa20.68■□□□□ 0.9
CCDC43-201ENST00000315286 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.68■□□□□ 0.9
CCDC43-201ENST00000315286 SMCHD1A6NHR9 2005 aa20.67■□□□□ 0.9
CCDC43-201ENST00000315286 TMEM266Q2M3C6 531 aa20.67■□□□□ 0.9
CCDC43-201ENST00000315286 USH1GQ495M9 461 aa20.67■□□□□ 0.9
CCDC43-201ENST00000315286 KMT5BQ4FZB7 885 aa20.67■□□□□ 0.9
CCDC43-201ENST00000315286 HAS1Q92839 578 aa20.67■□□□□ 0.9
CCDC43-201ENST00000315286 CALML4Q96GE6 196 aa20.67■□□□□ 0.9
CCDC43-201ENST00000315286 MAGEF1Q9HAY2 307 aa20.67■□□□□ 0.9
CCDC43-201ENST00000315286 PRR12Q9ULL5 1215 aa20.67■□□□□ 0.9
CCDC43-201ENST00000315286 SCAF8Q9UPN6 1271 aaKnown RBP20.67■□□□□ 0.9
CCDC43-201ENST00000315286 POTEMA6NI47 508 aa20.66■□□□□ 0.9
CCDC43-201ENST00000315286 TAL1P17542 331 aaPredicted RBP20.66■□□□□ 0.9
CCDC43-201ENST00000315286 PDIA5Q14554 519 aa20.66■□□□□ 0.9
CCDC43-201ENST00000315286 KCNB1Q14721 858 aa20.66■□□□□ 0.9
CCDC43-201ENST00000315286 CDKAL1Q5VV42 579 aa20.66■□□□□ 0.9
CCDC43-201ENST00000315286 P2RX7Q99572 595 aaKnown RBP20.66■□□□□ 0.9
CCDC43-201ENST00000315286 ANO3Q9BYT9 981 aa20.66■□□□□ 0.9
CCDC43-201ENST00000315286 MAPK8IP1Q9UQF2 711 aa20.66■□□□□ 0.9
CCDC43-201ENST00000315286 GCFC2P16383 781 aaKnown RBP20.66■□□□□ 0.9
CCDC43-201ENST00000315286 SFPQP23246 707 aaKnown RBP eCLIP20.66■□□□□ 0.9
CCDC43-201ENST00000315286 PRCPP42785 496 aa20.66■□□□□ 0.9
CCDC43-201ENST00000315286 GRB10Q13322 594 aa20.66■□□□□ 0.9
CCDC43-201ENST00000315286 APTXQ7Z2E3 356 aaKnown RBP20.66■□□□□ 0.9
CCDC43-201ENST00000315286 GJA10Q969M2 543 aa20.66■□□□□ 0.9
CCDC43-201ENST00000315286 RWDD2AQ9UIY3 292 aa20.66■□□□□ 0.9
CCDC43-201ENST00000315286 CAP2P40123 477 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 TNIP1Q15025 636 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 PNMA5Q96PV4 448 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 RAB34Q9BZG1 259 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 BCS1LQ9Y276 419 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 EGFRP00533 1210 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 STAT2P52630 851 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 PAK1Q13153 545 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 NR1I3Q14994 352 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 R3HDM1Q15032 1099 aaKnown RBP20.65■□□□□ 0.9
CCDC43-201ENST00000315286 FAM83BQ5T0W9 1011 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 NELFBQ8WX92 580 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 NUDT12Q9BQG2 462 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 TRIM9Q9C026 710 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 GOPCQ9HD26 462 aa20.65■□□□□ 0.9
CCDC43-201ENST00000315286 RHOBTB3O94955 611 aa20.64■□□□□ 0.89
CCDC43-201ENST00000315286 USP11P51784 963 aa20.64■□□□□ 0.89
CCDC43-201ENST00000315286 AP3B2Q13367 1082 aa20.64■□□□□ 0.89
CCDC43-201ENST00000315286 DHX8Q14562 1220 aaKnown RBP20.64■□□□□ 0.89
CCDC43-201ENST00000315286 C7orf25Q9BPX7 421 aa20.64■□□□□ 0.89
CCDC43-201ENST00000315286 A0A1B0GTH6 734 aa20.63■□□□□ 0.89
CCDC43-201ENST00000315286 MAP3K10Q02779 954 aa20.63■□□□□ 0.89
CCDC43-201ENST00000315286 TPD52L1Q16890 204 aaPredicted RBP20.63■□□□□ 0.89
CCDC43-201ENST00000315286 ADSSL1Q8N142 457 aa20.63■□□□□ 0.89
CCDC43-201ENST00000315286 NAP1L4Q99733 375 aaKnown RBP20.63■□□□□ 0.89
CCDC43-201ENST00000315286 BLOC1S4Q9NUP1 217 aa20.63■□□□□ 0.89
CCDC43-201ENST00000315286 OPLAHO14841 1288 aa20.63■□□□□ 0.89
CCDC43-201ENST00000315286 MARCH6O60337 910 aa20.63■□□□□ 0.89
CCDC43-201ENST00000315286 MMP14P50281 582 aa20.63■□□□□ 0.89
CCDC43-201ENST00000315286 TERF1P54274 439 aa20.63■□□□□ 0.89
CCDC43-201ENST00000315286 ZNF280AP59817 542 aaPredicted RBP20.63■□□□□ 0.89
CCDC43-201ENST00000315286 RASA3Q14644 834 aa20.63■□□□□ 0.89
CCDC43-201ENST00000315286 CRYGNQ8WXF5 182 aa20.63■□□□□ 0.89
CCDC43-201ENST00000315286 PCDHA12Q9UN75 941 aa20.63■□□□□ 0.89
CCDC43-201ENST00000315286 CYP3A7-CYP3A51PA0A087WV96 503 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 CYP3A7P24462 503 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 TBX2Q13207 712 aaPredicted RBP20.62■□□□□ 0.89
CCDC43-201ENST00000315286 SEMA3FQ13275 785 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 ZYXQ15942 572 aaKnown RBP20.62■□□□□ 0.89
CCDC43-201ENST00000315286 KRT79Q5XKE5 535 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 GIMAP8Q8ND71 665 aaPredicted RBP20.62■□□□□ 0.89
CCDC43-201ENST00000315286 SNX29Q8TEQ0 813 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 UIMC1Q96RL1 719 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 GLIS2Q9BZE0 524 aaPredicted RBP20.62■□□□□ 0.89
CCDC43-201ENST00000315286 USP27XA6NNY8 438 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 ARHGAP4P98171 946 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 AMPD3Q01432 767 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms