RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 MLXIPQ9HAP2 919 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 CCDC87Q9NVE4 849 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 FLT1P17948 1338 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 CRKLP46109 303 aaKnown RBP14.96□□□□□ -0.01
SKA3-202ENST00000314759 SLC35G1Q2M3R5 365 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 SPATA4Q8NEY3 305 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 CRNKL1Q9BZJ0 848 aaKnown RBP14.96□□□□□ -0.01
SKA3-202ENST00000314759 IL17RBQ9NRM6 502 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 ARHGAP20Q9P2F6 1191 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 PLAGL2Q9UPG8 496 aa14.96□□□□□ -0.01
SKA3-202ENST00000314759 TXNRD1Q16881 649 aa14.96□□□□□ -0.02
SKA3-202ENST00000314759 CCDC70Q6NSX1 233 aa14.96□□□□□ -0.02
SKA3-202ENST00000314759 KCNV1Q6PIU1 500 aa14.96□□□□□ -0.02
SKA3-202ENST00000314759 C3orf67Q6ZVT6 689 aa14.96□□□□□ -0.02
SKA3-202ENST00000314759 ZNF572Q7Z3I7 529 aaPredicted RBP14.96□□□□□ -0.02
SKA3-202ENST00000314759 ANKRD18AQ8IVF6 992 aa14.96□□□□□ -0.02
SKA3-202ENST00000314759 FAM114A1Q8IWE2 563 aa14.96□□□□□ -0.02
SKA3-202ENST00000314759 IFIH1Q9BYX4 1025 aaKnown RBP14.96□□□□□ -0.02
SKA3-202ENST00000314759 SH2D4AQ9H788 454 aa14.96□□□□□ -0.02
SKA3-202ENST00000314759 SAMM50Q9Y512 469 aa14.96□□□□□ -0.02
SKA3-202ENST00000314759 PCDHA13Q9Y5I0 950 aa14.96□□□□□ -0.02
SKA3-202ENST00000314759 A0A1B0GUL6 1792 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 EBAG9O00559 213 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 EPHB6O15197 1021 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 HNRNPH1P31943 449 aaKnown RBP14.95□□□□□ -0.02
SKA3-202ENST00000314759 SLC7A5Q01650 507 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 PNMA1Q8ND90 353 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 BCAS4Q8TDM0 211 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 HPS3Q969F9 1004 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 ATP8A2Q9NTI2 1148 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 SLAIN2Q9P270 581 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 ABCA3Q99758 1704 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 TACC1O75410 805 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 MOCS3O95396 460 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 ADAMTS2O95450 1211 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 KLRK1P26718 216 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 HNRNPH3P31942 346 aaKnown RBP14.95□□□□□ -0.02
SKA3-202ENST00000314759 ITIH3Q06033 890 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 CABP7Q86V35 215 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 C2CD5Q86YS7 1000 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 SMARCAL1Q9NZC9 954 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 MINPP1Q9UNW1 487 aa14.95□□□□□ -0.02
SKA3-202ENST00000314759 GRIN2DO15399 1336 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 CYTH3O43739 400 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 USO1O60763 962 aaKnown RBP14.94□□□□□ -0.02
SKA3-202ENST00000314759 PRLRP16471 622 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 CXCR5P32302 372 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 PRPHP41219 470 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 MATR3P43243 847 aaKnown RBP eCLIP14.94□□□□□ -0.02
SKA3-202ENST00000314759 ASIC1P78348 528 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 TFAP4Q01664 338 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 SBK1Q52WX2 424 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 FKBP15Q5T1M5 1219 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 SWT1Q5T5J6 900 aaKnown RBP14.94□□□□□ -0.02
SKA3-202ENST00000314759 NFRKBQ6P4R8 1299 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 HEATR3Q7Z4Q2 680 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 OSBPL9Q96SU4 736 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 PSMB7Q99436 277 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 CAPS2Q9BXY5 557 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 CUEDC2Q9H467 287 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 ARPP21Q9UBL0 812 aaPredicted RBP14.94□□□□□ -0.02
SKA3-202ENST00000314759 MAD2L2Q9UI95 211 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 LAD1O00515 517 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 GNGT1P63211 74 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 PPFIA1Q13136 1202 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 DAGLBQ8NCG7 672 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 SH3GL2Q99962 352 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 C7orf25Q9BPX7 421 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 SEMA6BQ9H3T3 888 aa14.94□□□□□ -0.02
SKA3-202ENST00000314759 BSDC1Q9NW68 430 aaPredicted RBP14.94□□□□□ -0.02
SKA3-202ENST00000314759 PRDX5P30044 214 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 KIF11P52732 1056 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 KIAA0895Q8NCT3 520 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 MAGEF1Q9HAY2 307 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 FAM207AQ9NSI2 230 aaPredicted RBP14.93□□□□□ -0.02
SKA3-202ENST00000314759 TCP11L1Q9NUJ3 509 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 EHD2Q9NZN4 543 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 SIK3Q9Y2K2 1263 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 MYH10P35580 1976 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 RREB1Q92766 1687 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 STXBP3O00186 592 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 USP17L8P0C7I0 530 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 EIF4A3P38919 411 aaKnown RBP14.93□□□□□ -0.02
SKA3-202ENST00000314759 FBXO33Q7Z6M2 555 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 DGKHQ86XP1 1220 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 GPIHBP1Q8IV16 184 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 CCDC47Q96A33 483 aaKnown RBP14.93□□□□□ -0.02
SKA3-202ENST00000314759 MCM9Q9NXL9 1143 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 BARHL2Q9NY43 387 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 LCA5LO95447 670 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 ATP6V1AP38606 617 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 MNAT1P51948 309 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 GRM4Q14833 912 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 TSEN2Q8NCE0 465 aaKnown RBP14.93□□□□□ -0.02
SKA3-202ENST00000314759 AK8Q96MA6 479 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 POLD4Q9HCU8 107 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 SALL4Q9UJQ4 1053 aa14.93□□□□□ -0.02
SKA3-202ENST00000314759 PHLPP1O60346 1717 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 EIF3HO15372 352 aaKnown RBP eCLIP14.92□□□□□ -0.02
SKA3-202ENST00000314759 HAUS3Q68CZ6 603 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms