RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 SNAP25P60880 206 aa12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 TYRO3Q06418 890 aa12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 FMR1Q06787 632 aaKnown RBP eCLIP12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 STX1AQ16623 288 aa12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 PPP4R3AQ6IN85 833 aa12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 RBM43Q6ZSC3 357 aaKnown RBP12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 GAS2L3Q86XJ1 694 aa12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 ELOA2Q8IYF1 753 aaPredicted RBP12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 ANKRD13AQ8IZ07 590 aa12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 SAMD3Q8N6K7 520 aa12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 ZNF784Q8NCA9 323 aaPredicted RBP12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 CCPG1Q9ULG6 757 aa12.91□□□□□ -0.34
CTDSPL-202ENST00000310189 POLR2AP24928 1970 aaKnown RBP12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 POLR2DO15514 142 aaKnown RBP12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 CELF2O95319 508 aaKnown RBP12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 SMC2O95347 1197 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 ICAM1P05362 532 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 VCAM1P19320 739 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 ZNF76P36508 570 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 CALCRLQ16602 461 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 UVSSAQ2YD98 709 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 KIAA1755Q5JYT7 1200 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 KRBA2Q6ZNG9 492 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 IQUBQ8NA54 791 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 ANO3Q9BYT9 981 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 DDX25Q9UHL0 483 aaKnown RBP12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 PPP1R9AQ9ULJ8 1098 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 RABGAP1Q9Y3P9 1069 aa12.9□□□□□ -0.34
CTDSPL-202ENST00000310189 USP17L15C9J2P7 530 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 USP17L13C9JLJ4 530 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 USP17L11C9JVI0 530 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 USP17L18D6R9N7 530 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 USP17L22D6RA61 530 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 USP17L17D6RBQ6 530 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 USP17L19D6RCP7 530 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 USP17L20D6RJB6 530 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 PIK3CDO00329 1044 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 TOMM70O94826 608 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 CFBP00751 764 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 HMGCS2P54868 508 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 USP17L24Q0WX57 530 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 USP17L6PQ6QN14 398 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 MOXD1Q6UVY6 613 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 MOB2Q70IA6 237 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 C2orf69Q8N8R5 385 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 SYMPKQ92797 1274 aaKnown RBP12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 C12orf42Q96LP6 360 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 GBA2Q9HCG7 927 aaPredicted RBP12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 EMILIN3Q9NT22 766 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 HOXC10Q9NYD6 342 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 MAP3K20Q9NYL2 800 aaKnown RBP12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 KIAA1468Q9P260 1216 aa12.89□□□□□ -0.35
CTDSPL-202ENST00000310189 ADAMTS3O15072 1205 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 CAPN15O75808 1086 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 FKBP1BP68106 108 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 PPATQ06203 517 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 VGLL4Q14135 290 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 COG2Q14746 738 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 SLFN12Q8IYM2 578 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 PDILTQ8N807 584 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 C4orf32Q8N8J7 132 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 CALML4Q96GE6 196 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 CDK5RAP3Q96JB5 506 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 RBSNQ9H1K0 784 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 STK24Q9Y6E0 443 aa12.88□□□□□ -0.35
CTDSPL-202ENST00000310189 PAPPA2Q9BXP8 1791 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 GOLGA6L19H0YKK7 550 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 MEIS2O14770 477 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 XRCC6P12956 609 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 TXKP42681 527 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 OAZ1P54368 228 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 TPM4P67936 248 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 RRAGBQ5VZM2 374 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 ERO1BQ86YB8 467 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 CPXCR1Q8N123 301 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 RNF214Q8ND24 703 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 FAM200AQ8TCP9 573 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 DHX58Q96C10 678 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 EPSTI1Q96J88 318 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 PANK2Q9BZ23 570 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 SLC38A10Q9HBR0 1119 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 DACH1Q9UI36 760 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 AFG3L2Q9Y4W6 797 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 MRVI1Q9Y6F6 885 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 SNCAIPQ9Y6H5 919 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 MYPNQ86TC9 1320 aa12.87□□□□□ -0.35
CTDSPL-202ENST00000310189 UNCXA6NJT0 531 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 WNT7AO00755 349 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 SLFN14P0C7P3 912 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 ALAS1P13196 640 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 SREBF1P36956 1147 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 STAT6P42226 847 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 ARHGAP4P98171 946 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 GRIN1Q05586 938 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms