RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 EPN1Q9Y6I3 576 aaPredicted RBP12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 CYP2J2P51589 502 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 IRX3P78415 501 aaPredicted RBP12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 GOLGA8FQ08AF8 430 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 GOLGA8DPQ0D2H9 430 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 ZBTB9Q96C00 473 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 IWS1Q96ST2 819 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 CEP83Q9Y592 693 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 IFT172Q9UG01 1749 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 STAT2P52630 851 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 GNPTABQ3T906 1256 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 FBXO33Q7Z6M2 555 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 VSTM4Q8IW00 320 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 RTKN2Q8IZC4 609 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 RWDD2AQ9UIY3 292 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 GOLGA6L7A0A1B0GV03 622 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 NEDD1Q8NHV4 660 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 HAUS4Q9H6D7 363 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 CALCOCO1Q9P1Z2 691 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 CSADQ9Y600 493 aa12.63□□□□□ -0.39
PCDHGC3-201ENST00000308177 BCRP11274 1271 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 OTUD6AQ7L8S5 288 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 PSMB7Q99436 277 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 UBR1Q8IWV7 1749 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 RNASE9P60153 205 aaKnown RBP12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 UBXN2AP68543 259 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 AZI2Q9H6S1 392 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 METTL14Q9HCE5 456 aaKnown RBP12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 IGSF3O75054 1194 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 GH2P01242 217 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 C8orf74Q6P047 294 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 SHC4Q6S5L8 630 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 TBC1D16Q8TBP0 767 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 BBXQ8WY36 941 aaPredicted RBP12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 PPP1R13BQ96KQ4 1090 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 CTDNEP1O95476 244 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 CCNE1P24864 410 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 LRRC41Q15345 812 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 CCDC155Q8N6L0 562 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 TDRD3Q9H7E2 651 aaKnown RBP12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 ZNF408Q9H9D4 720 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 SAR1BQ9Y6B6 198 aa12.62□□□□□ -0.39
PCDHGC3-201ENST00000308177 SPOPO43791 374 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 FDPSP14324 419 aaKnown RBP12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 RBL2Q08999 1139 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 MIGA2Q7L4E1 593 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 CCDC50Q8IVM0 306 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 CRAMP1Q96RY5 1269 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 MTUS1Q9ULD2 1270 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 STAT1P42224 750 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 FKBP3Q00688 224 aaKnown RBP12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 ERCC6LQ2NKX8 1250 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 SBK1Q52WX2 424 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 XKR9Q5GH70 373 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 DPH6Q7L8W6 267 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 GOLGA5Q8TBA6 731 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 GJA10Q969M2 543 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 RIC8AQ9NPQ8 531 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 KCNG1Q9UIX4 513 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 COL5A2P05997 1499 aaPredicted RBP12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 FAM196BA6NMK8 535 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 ZBTB5O15062 677 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 MAP2K1Q02750 393 aaPredicted RBP12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 ARHGAP44Q17R89 818 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 KMT5BQ4FZB7 885 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 SRBD1Q8N5C6 995 aaKnown RBP12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 ANO3Q9BYT9 981 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 SENP2Q9HC62 589 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 IVNS1ABPQ9Y6Y0 642 aa12.61□□□□□ -0.39
PCDHGC3-201ENST00000308177 ECE2O60344 883 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 CASP1P29466 404 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 POLR2FP61218 127 aaKnown RBP12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 UTP14CQ5TAP6 766 aaKnown RBP12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 GBP6Q6ZN66 633 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 TRIM58Q8NG06 486 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 BARHL2Q9NY43 387 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 SMC1AQ14683 1233 aaKnown RBP12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 FAM102BQ5T8I3 360 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 NAP1L3Q99457 506 aaPredicted RBP12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 K7ENM7 598 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 PLCB3Q01970 1234 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 CUL4BQ13620 913 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 ODR4Q5SWX8 454 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 SEL1L2Q5TEA6 688 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 STAG2Q8N3U4 1231 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 CCDC26Q8TAB7 109 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 ZNF577Q9BSK1 485 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 VPS18Q9P253 973 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 CTTNBP2NLQ9P2B4 639 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 TSKSQ9UJT2 592 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 NR2F2P24468 414 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 WDR11Q9BZH6 1224 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 SUGT1Q9Y2Z0 365 aa12.6□□□□□ -0.39
PCDHGC3-201ENST00000308177 SEPT2Q15019 361 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 RPS6KA1Q15418 735 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 CFAP58Q5T655 872 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms