RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ADGRA1Q86SQ6 560 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 MRFAP1Q9Y605 127 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 KLRK1P26718 216 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 MNAT1P51948 309 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 VAV2P52735 878 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 TRIM28Q13263 835 aaKnown RBP15.6■□□□□ 0.09
SDC2-201ENST00000302190 TRIM14Q14142 442 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 TTC31Q49AM3 519 aaPredicted RBP15.6■□□□□ 0.09
SDC2-201ENST00000302190 MFSD14BQ5SR56 506 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 NBPF3Q9H094 633 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 SALL1Q9NSC2 1324 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 NUP98P52948 1817 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 NTSR2O95665 410 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 OR52Z1P0C646 297 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 DNM2P50570 870 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 GTF2IP78347 998 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 RDH13Q8NBN7 331 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 FAM217BQ9NTX9 383 aaPredicted RBP15.6■□□□□ 0.09
SDC2-201ENST00000302190 ZNF446Q9NWS9 450 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 VEGFAP15692 232 aaPredicted RBP15.59■□□□□ 0.09
SDC2-201ENST00000302190 PLA2G4AP47712 749 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 ZNF658Q5TYW1 1059 aaPredicted RBP15.59■□□□□ 0.09
SDC2-201ENST00000302190 CNNM4Q6P4Q7 775 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 CNBD1Q8NA66 436 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 NOA1Q8NC60 698 aaKnown RBP15.59■□□□□ 0.09
SDC2-201ENST00000302190 TBCKQ8TEA7 893 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 PIGSQ96S52 555 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 HAUS4Q9H6D7 363 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 ZBTB21Q9ULJ3 1066 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 MINPP1Q9UNW1 487 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 ZNF804BA4D1E1 1349 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 ERVV-1B6SEH8 477 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 EBAG9O00559 213 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 ZNF185O15231 689 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 MOCS3O95396 460 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 IVLP07476 585 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 GSTO1P78417 241 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 CFAP58Q5T655 872 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 ANKRD2Q9GZV1 360 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 DCP1AQ9NPI6 582 aaPredicted RBP15.59■□□□□ 0.09
SDC2-201ENST00000302190 NARFQ9UHQ1 456 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 SAMM50Q9Y512 469 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 ABCC12Q96J65 1359 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 HGSO14964 777 aaPredicted RBP15.59■□□□□ 0.09
SDC2-201ENST00000302190 ACTN4O43707 911 aaKnown RBP15.59■□□□□ 0.09
SDC2-201ENST00000302190 ZYXQ15942 572 aaKnown RBP15.59■□□□□ 0.09
SDC2-201ENST00000302190 WHAMMP3Q1A5X7 153 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 CLEC10AQ8IUN9 316 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 PANX2Q96RD6 677 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 SMARCAL1Q9NZC9 954 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 HPSEQ9Y251 543 aa15.59■□□□□ 0.09
SDC2-201ENST00000302190 FCER1AP12319 257 aa15.58■□□□□ 0.09
SDC2-201ENST00000302190 CYP4A11Q02928 519 aa15.58■□□□□ 0.09
SDC2-201ENST00000302190 UBE4AQ14139 1066 aa15.58■□□□□ 0.09
SDC2-201ENST00000302190 ARPP21Q9UBL0 812 aaPredicted RBP15.58■□□□□ 0.09
SDC2-201ENST00000302190 GYPCP04921 128 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 RDXP35241 583 aaKnown RBP15.58■□□□□ 0.08
SDC2-201ENST00000302190 KLK7P49862 253 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 CDR1P51861 262 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 POLR2FP61218 127 aaKnown RBP15.58■□□□□ 0.08
SDC2-201ENST00000302190 SYCP3Q8IZU3 236 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 GJA10Q969M2 543 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 AGPAT5Q9NUQ2 364 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 FHOD1Q9Y613 1164 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 NDUFAB1O14561 156 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 RNF40O75150 1001 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 NAA35Q5VZE5 725 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 VPS36Q86VN1 386 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 CCDC51Q96ER9 411 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 ZC3H12CQ9C0D7 883 aaKnown RBP15.58■□□□□ 0.08
SDC2-201ENST00000302190 L2HGDHQ9H9P8 463 aa15.58■□□□□ 0.08
SDC2-201ENST00000302190 PPP1R1BQ9UD71 204 aaPredicted RBP15.58■□□□□ 0.08
SDC2-201ENST00000302190 A0A087X0B3 334 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 POTEMA6NI47 508 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 CEP104O60308 925 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 TBCAO75347 108 aaKnown RBP15.57■□□□□ 0.08
SDC2-201ENST00000302190 MAP3K9P80192 1104 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 EHHADHQ08426 723 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 NR1I3Q14994 352 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 NEK8Q86SG6 692 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 DISC1Q9NRI5 854 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 ADD3Q9UEY8 706 aaKnown RBP15.57■□□□□ 0.08
SDC2-201ENST00000302190 PCDHA4Q9UN74 947 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.57■□□□□ 0.08
SDC2-201ENST00000302190 PLEKHG2Q9H7P9 1386 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 DDAH1O94760 285 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 BTDP43251 543 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 UBE2SQ16763 222 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 TBC1D10BQ4KMP7 808 aaPredicted RBP15.57■□□□□ 0.08
SDC2-201ENST00000302190 COL23A1Q86Y22 540 aaPredicted RBP15.57■□□□□ 0.08
SDC2-201ENST00000302190 SH3RF3Q8TEJ3 882 aaPredicted RBP15.57■□□□□ 0.08
SDC2-201ENST00000302190 FAM84BQ96KN1 310 aaPredicted RBP15.57■□□□□ 0.08
SDC2-201ENST00000302190 NHEJ1Q9H9Q4 299 aaPredicted RBP15.57■□□□□ 0.08
SDC2-201ENST00000302190 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.57■□□□□ 0.08
SDC2-201ENST00000302190 PCDHB13Q9Y5F0 798 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 FTCDO95954 541 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 LONP1P36776 959 aaKnown RBP15.57■□□□□ 0.08
SDC2-201ENST00000302190 TRIM65Q6PJ69 517 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 RASGRP2Q7LDG7 609 aa15.57■□□□□ 0.08
SDC2-201ENST00000302190 KSR1Q8IVT5 923 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms