RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ARPP21Q9UBL0 812 aaPredicted RBP24.52■■□□□ 1.52
SMCO4-201ENST00000298966 FBXO40Q9UH90 709 aa24.52■■□□□ 1.52
SMCO4-201ENST00000298966 ANAPC4Q9UJX5 808 aa24.52■■□□□ 1.52
SMCO4-201ENST00000298966 GREB1LQ9C091 1923 aaPredicted RBP24.52■■□□□ 1.52
SMCO4-201ENST00000298966 TCF20Q9UGU0 1960 aaKnown RBP24.51■■□□□ 1.51
SMCO4-201ENST00000298966 F5H6K3 240 aa24.51■■□□□ 1.51
SMCO4-201ENST00000298966 CD4P01730 458 aa24.51■■□□□ 1.51
SMCO4-201ENST00000298966 KLRC3Q07444 240 aa24.51■■□□□ 1.51
SMCO4-201ENST00000298966 SBK1Q52WX2 424 aa24.51■■□□□ 1.51
SMCO4-201ENST00000298966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.51■■□□□ 1.51
SMCO4-201ENST00000298966 ARMCX2Q7L311 632 aa24.51■■□□□ 1.51
SMCO4-201ENST00000298966 NCOA7Q8NI08 942 aa24.51■■□□□ 1.51
SMCO4-201ENST00000298966 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.51■■□□□ 1.51
SMCO4-201ENST00000298966 PDRG1Q9NUG6 133 aa24.51■■□□□ 1.51
SMCO4-201ENST00000298966 NYAP2Q9P242 653 aa24.51■■□□□ 1.51
SMCO4-201ENST00000298966 NDUFB10O96000 172 aa24.5■■□□□ 1.51
SMCO4-201ENST00000298966 DHX32Q7L7V1 743 aaKnown RBP24.5■■□□□ 1.51
SMCO4-201ENST00000298966 RALYLQ86SE5 291 aaKnown RBP24.5■■□□□ 1.51
SMCO4-201ENST00000298966 CHST13Q8NET6 341 aa24.5■■□□□ 1.51
SMCO4-201ENST00000298966 HIPK3Q9H422 1215 aa24.5■■□□□ 1.51
SMCO4-201ENST00000298966 RAVER2Q9HCJ3 691 aaKnown RBP24.5■■□□□ 1.51
SMCO4-201ENST00000298966 YBX2Q9Y2T7 364 aaKnown RBP24.5■■□□□ 1.51
SMCO4-201ENST00000298966 SLC3A2P08195 630 aaKnown RBP24.49■■□□□ 1.51
SMCO4-201ENST00000298966 BEX3Q00994 111 aa24.49■■□□□ 1.51
SMCO4-201ENST00000298966 NOL8Q76FK4 1167 aaKnown RBP24.49■■□□□ 1.51
SMCO4-201ENST00000298966 FBXL16Q8N461 479 aa24.49■■□□□ 1.51
SMCO4-201ENST00000298966 KIFC2Q96AC6 838 aa24.49■■□□□ 1.51
SMCO4-201ENST00000298966 FGD4Q96M96 766 aa24.49■■□□□ 1.51
SMCO4-201ENST00000298966 MKNK2Q9HBH9 465 aa24.49■■□□□ 1.51
SMCO4-201ENST00000298966 MYH4Q9Y623 1939 aa24.49■■□□□ 1.51
SMCO4-201ENST00000298966 CTAGE5O15320 804 aa24.48■■□□□ 1.51
SMCO4-201ENST00000298966 CABYRO75952 493 aa24.48■■□□□ 1.51
SMCO4-201ENST00000298966 NKX3-2P78367 333 aa24.48■■□□□ 1.51
SMCO4-201ENST00000298966 OTOP2Q7RTS6 562 aa24.48■■□□□ 1.51
SMCO4-201ENST00000298966 CCDC144CPQ8IYA2 1237 aa24.48■■□□□ 1.51
SMCO4-201ENST00000298966 MICALL1Q8N3F8 863 aa24.48■■□□□ 1.51
SMCO4-201ENST00000298966 ZSCAN31Q96LW9 406 aaPredicted RBP24.48■■□□□ 1.51
SMCO4-201ENST00000298966 C1QTNF1Q9BXJ1 281 aa24.48■■□□□ 1.51
SMCO4-201ENST00000298966 KRT23Q9C075 422 aa24.48■■□□□ 1.51
SMCO4-201ENST00000298966 SLC38A10Q9HBR0 1119 aa24.48■■□□□ 1.51
SMCO4-201ENST00000298966 RASA1P20936 1047 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 TNFAIP2Q03169 654 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 PPARAQ07869 468 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 AAK1Q2M2I8 961 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 PPP2R2DQ66LE6 453 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 CXCL17Q6UXB2 119 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 STOX1Q6ZVD7 989 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 SLC43A3Q8NBI5 491 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 STAG1Q8WVM7 1258 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 MTA3Q9BTC8 594 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 FEM1BQ9UK73 627 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 SLC4A7Q9Y6M7 1214 aa24.47■■□□□ 1.51
SMCO4-201ENST00000298966 UMODL1Q5DID0 1318 aa24.46■■□□□ 1.51
SMCO4-201ENST00000298966 MCM5P33992 734 aa24.46■■□□□ 1.51
SMCO4-201ENST00000298966 OAZ1P54368 228 aa24.46■■□□□ 1.51
SMCO4-201ENST00000298966 CCL23P55773 120 aa24.46■■□□□ 1.51
SMCO4-201ENST00000298966 HAND2P61296 217 aa24.46■■□□□ 1.51
SMCO4-201ENST00000298966 RPUSD2Q8IZ73 545 aaKnown RBP24.46■■□□□ 1.51
SMCO4-201ENST00000298966 STK11IPQ8N1F8 1099 aa24.46■■□□□ 1.51
SMCO4-201ENST00000298966 SEZ6LQ9BYH1 1024 aa24.46■■□□□ 1.51
SMCO4-201ENST00000298966 KATNBL1Q9H079 304 aa24.46■■□□□ 1.51
SMCO4-201ENST00000298966 SH2B1Q9NRF2 756 aaPredicted RBP24.46■■□□□ 1.51
SMCO4-201ENST00000298966 CLIP2Q9UDT6 1046 aa24.46■■□□□ 1.51
SMCO4-201ENST00000298966 LIMCH1Q9UPQ0 1083 aa24.46■■□□□ 1.51
SMCO4-201ENST00000298966 AK2P54819 239 aa24.45■■□□□ 1.5
SMCO4-201ENST00000298966 ITGA7Q13683 1181 aa24.45■■□□□ 1.5
SMCO4-201ENST00000298966 MFSD6Q6ZSS7 791 aa24.45■■□□□ 1.5
SMCO4-201ENST00000298966 CHMP4CQ96CF2 233 aa24.45■■□□□ 1.5
SMCO4-201ENST00000298966 NECAB3Q96P71 396 aaPredicted RBP24.45■■□□□ 1.5
SMCO4-201ENST00000298966 AP5M1Q9H0R1 490 aa24.45■■□□□ 1.5
SMCO4-201ENST00000298966 CHD7Q9P2D1 2997 aa24.45■■□□□ 1.5
SMCO4-201ENST00000298966 PCDHA11Q9Y5I1 949 aa24.45■■□□□ 1.5
SMCO4-201ENST00000298966 TAF6LQ9Y6J9 622 aa24.45■■□□□ 1.5
SMCO4-201ENST00000298966 ZEB2O60315 1214 aa24.44■■□□□ 1.5
SMCO4-201ENST00000298966 HSP90AA1P07900 732 aaKnown RBP24.44■■□□□ 1.5
SMCO4-201ENST00000298966 BMP1P13497 986 aa24.44■■□□□ 1.5
SMCO4-201ENST00000298966 RABGGTBP53611 331 aa24.44■■□□□ 1.5
SMCO4-201ENST00000298966 EXOSC10Q01780 885 aaKnown RBP24.44■■□□□ 1.5
SMCO4-201ENST00000298966 NOC4LQ9BVI4 516 aaKnown RBP24.44■■□□□ 1.5
SMCO4-201ENST00000298966 AGXT2Q9BYV1 514 aa24.44■■□□□ 1.5
SMCO4-201ENST00000298966 HOMER2Q9NSB8 354 aa24.44■■□□□ 1.5
SMCO4-201ENST00000298966 ASTN1O14525 1302 aa24.43■■□□□ 1.5
SMCO4-201ENST00000298966 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.43■■□□□ 1.5
SMCO4-201ENST00000298966 ZBBXA8MT70 800 aa24.43■■□□□ 1.5
SMCO4-201ENST00000298966 CNTN2Q02246 1040 aa24.43■■□□□ 1.5
SMCO4-201ENST00000298966 SKIV2LQ15477 1246 aaKnown RBP24.43■■□□□ 1.5
SMCO4-201ENST00000298966 FSCN1Q16658 493 aaKnown RBP24.43■■□□□ 1.5
SMCO4-201ENST00000298966 TLK2Q86UE8 772 aa24.43■■□□□ 1.5
SMCO4-201ENST00000298966 MB21D2Q8IYB1 491 aaPredicted RBP24.43■■□□□ 1.5
SMCO4-201ENST00000298966 INTS4Q96HW7 963 aaKnown RBP24.43■■□□□ 1.5
SMCO4-201ENST00000298966 ACAD9Q9H845 621 aa24.43■■□□□ 1.5
SMCO4-201ENST00000298966 ASB14A6NK59 587 aa24.42■■□□□ 1.5
SMCO4-201ENST00000298966 MINDY4BA8MYZ0 360 aa24.42■■□□□ 1.5
SMCO4-201ENST00000298966 FGRP09769 529 aa24.42■■□□□ 1.5
SMCO4-201ENST00000298966 FDX1P10109 184 aa24.42■■□□□ 1.5
SMCO4-201ENST00000298966 TBC1D10CQ8IV04 446 aa24.42■■□□□ 1.5
SMCO4-201ENST00000298966 FAM133AQ8N9E0 248 aa24.42■■□□□ 1.5
SMCO4-201ENST00000298966 TMX3Q96JJ7 454 aa24.42■■□□□ 1.5
SMCO4-201ENST00000298966 TRPV6Q9H1D0 765 aa24.42■■□□□ 1.5
SMCO4-201ENST00000298966 WNT8AQ9H1J5 351 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms