RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 STK24Q9Y6E0 443 aa8.51□□□□□ -1.05
TRIM42-201ENST00000286349 PLIN4Q96Q06 1357 aa8.51□□□□□ -1.05
TRIM42-201ENST00000286349 COPB2P35606 906 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 GSDMDP57764 484 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 DPCR1Q3MIW9 517 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 TTC38Q5R3I4 469 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 NT5DC1Q5TFE4 455 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 AP1ARQ63HQ0 302 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 ARL6IP4Q66PJ3 421 aaKnown RBP8.5□□□□□ -1.05
TRIM42-201ENST00000286349 SPC24Q8NBT2 197 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 ANKRD20A12PQ8NF67 263 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 DYNLL2Q96FJ2 89 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 SPZ1Q9BXG8 430 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 TDRD3Q9H7E2 651 aaKnown RBP8.5□□□□□ -1.05
TRIM42-201ENST00000286349 VEZTQ9HBM0 779 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 SPTLC3Q9NUV7 552 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 UTP6Q9NYH9 597 aaKnown RBP8.5□□□□□ -1.05
TRIM42-201ENST00000286349 MAD2L2Q9UI95 211 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 PCDHA4Q9UN74 947 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 SCAF8Q9UPN6 1271 aaKnown RBP8.5□□□□□ -1.05
TRIM42-201ENST00000286349 PALM3A6NDB9 673 aaPredicted RBP8.5□□□□□ -1.05
TRIM42-201ENST00000286349 CBFA2T2O43439 604 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 PEX14O75381 377 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 SMC2O95347 1197 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 ECEL1O95672 775 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 POTEIP0CG38 1075 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 POTEJP0CG39 1038 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 TOP1P11387 765 aaKnown RBP8.5□□□□□ -1.05
TRIM42-201ENST00000286349 NOVP48745 357 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 PLCD1P51178 756 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 CACNB3P54284 484 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 ATP2C1P98194 919 aaPredicted RBP8.5□□□□□ -1.05
TRIM42-201ENST00000286349 NOLC1Q14978 699 aaKnown RBP eCLIP8.5□□□□□ -1.05
TRIM42-201ENST00000286349 POSTNQ15063 836 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 ZFPM1Q8IX07 1006 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 BLIDQ8IZY5 108 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 ADAMTSL1Q8N6G6 1762 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 MICAL1Q8TDZ2 1067 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 DRC1Q96MC2 740 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 CEP89Q96ST8 783 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 TMX1Q9H3N1 280 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 TAF1DQ9H5J8 278 aaPredicted RBP8.5□□□□□ -1.05
TRIM42-201ENST00000286349 TTC12Q9H892 705 aaPredicted RBP8.5□□□□□ -1.05
TRIM42-201ENST00000286349 NMRK2Q9NPI5 230 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 JADE2Q9NQC1 790 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 STX8Q9UNK0 236 aa8.5□□□□□ -1.05
TRIM42-201ENST00000286349 H7C1D1 291 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 SH3BP5O60239 455 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 NFIAQ12857 509 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 DLGAP5Q15398 846 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 NPY5RQ15761 445 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 KLHL10Q6JEL2 608 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 DLK2Q6UY11 383 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 METTL16Q86W50 562 aaKnown RBP8.49□□□□□ -1.05
TRIM42-201ENST00000286349 MLKLQ8NB16 471 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 KIAA1524Q8TCG1 905 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 SMARCE1Q969G3 411 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 TMEM47Q9BQJ4 181 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 GPBP1L1Q9HC44 474 aaPredicted RBP8.49□□□□□ -1.05
TRIM42-201ENST00000286349 DDX4Q9NQI0 724 aaKnown RBP8.49□□□□□ -1.05
TRIM42-201ENST00000286349 ADARB2Q9NS39 739 aaKnown RBP8.49□□□□□ -1.05
TRIM42-201ENST00000286349 USP40Q9NVE5 1235 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 SAP30BPQ9UHR5 308 aaKnown RBP8.49□□□□□ -1.05
TRIM42-201ENST00000286349 HACL1Q9UJ83 578 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 HDAC9Q9UKV0 1011 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 FOCADQ5VW36 1801 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 CLRN2A0PK11 232 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 LAD1O00515 517 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 POLR2DO15514 142 aaKnown RBP8.49□□□□□ -1.05
TRIM42-201ENST00000286349 PARP1P09874 1014 aaKnown RBP8.49□□□□□ -1.05
TRIM42-201ENST00000286349 EPHX2P34913 555 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 MDM2Q00987 491 aaPredicted RBP8.49□□□□□ -1.05
TRIM42-201ENST00000286349 MYL5Q02045 173 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 EVX2Q03828 476 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 KIF4BQ2VIQ3 1234 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 CCDC186Q7Z3E2 898 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 ANKRD7Q92527 254 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 CSRNP2Q9H175 543 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 BARHL2Q9NY43 387 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 ZNF70Q9UC06 446 aaPredicted RBP8.49□□□□□ -1.05
TRIM42-201ENST00000286349 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
TRIM42-201ENST00000286349 CDK5RAP2Q96SN8 1893 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 RBM47A0AV96 593 aaKnown RBP8.48□□□□□ -1.05
TRIM42-201ENST00000286349 STK10O94804 968 aaKnown RBP8.48□□□□□ -1.05
TRIM42-201ENST00000286349 HLA-DOAP06340 250 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 GNA11P29992 359 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 TXLNAP40222 546 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 ORC2Q13416 577 aaPredicted RBP8.48□□□□□ -1.05
TRIM42-201ENST00000286349 PNOCQ13519 176 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 SHISA4Q96DD7 197 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 SEC63Q9UGP8 760 aaKnown RBP8.48□□□□□ -1.05
TRIM42-201ENST00000286349 PGAP2Q9UHJ9 254 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 CCDC194A0A1B0GVG4 234 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 OATP04181 439 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 PTGS1P23219 599 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 LONP1P36776 959 aaKnown RBP8.48□□□□□ -1.05
TRIM42-201ENST00000286349 SARSP49591 514 aaKnown RBP8.48□□□□□ -1.05
TRIM42-201ENST00000286349 HNRNPH2P55795 449 aaKnown RBP8.48□□□□□ -1.05
TRIM42-201ENST00000286349 MCM6Q14566 821 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 PDCD2Q16342 344 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms