RNA–Protein interactions for RNA: ENST00000269141.7

CDH2-201, Transcript of cadherin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH2, Length 4,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-201ENST00000269141 C12orf60Q5U649 245 aa12.4□□□□□ -0.42
CDH2-201ENST00000269141 KIRREL3Q8IZU9 778 aa12.4□□□□□ -0.42
CDH2-201ENST00000269141 IGDCC4Q8TDY8 1250 aa12.4□□□□□ -0.42
CDH2-201ENST00000269141 TBC1D31Q96DN5 1066 aa12.4□□□□□ -0.42
CDH2-201ENST00000269141 GOLGA6CA6NDK9 693 aa12.4□□□□□ -0.43
CDH2-201ENST00000269141 GOLGA6BA6NDN3 693 aa12.4□□□□□ -0.43
CDH2-201ENST00000269141 GOLGA6DP0CG33 693 aa12.4□□□□□ -0.43
CDH2-201ENST00000269141 UBE2SQ16763 222 aa12.4□□□□□ -0.43
CDH2-201ENST00000269141 PAF1Q8N7H5 531 aa12.4□□□□□ -0.43
CDH2-201ENST00000269141 AFAP1L1Q8TED9 768 aa12.4□□□□□ -0.43
CDH2-201ENST00000269141 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.43
CDH2-201ENST00000269141 GOLGA6AQ9NYA3 693 aa12.4□□□□□ -0.43
CDH2-201ENST00000269141 LRWD1Q9UFC0 647 aa12.4□□□□□ -0.43
CDH2-201ENST00000269141 PNPLA7Q6ZV29 1317 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 EVX2Q03828 476 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 NFIAQ12857 509 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 ALX1Q15699 326 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 LINC00301Q8NCQ3 95 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 SEPT11Q9NVA2 429 aaKnown RBP12.39□□□□□ -0.43
CDH2-201ENST00000269141 MMP1P03956 469 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 MXRA7P84157 204 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 ZNF512BQ96KM6 892 aaPredicted RBP12.39□□□□□ -0.43
CDH2-201ENST00000269141 CARD6Q9BX69 1037 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 ROBO1Q9Y6N7 1651 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 RGPD5Q99666 1765 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 CCT6AP40227 531 aaKnown RBP12.39□□□□□ -0.43
CDH2-201ENST00000269141 NCAPH2Q6IBW4 605 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 SNX29Q8TEQ0 813 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 BICD1Q96G01 975 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 TSC22D3Q99576 134 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 PPP1R12CQ9BZL4 782 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 LMO7Q8WWI1 1683 aa12.39□□□□□ -0.43
CDH2-201ENST00000269141 FAM208AQ9UK61 1670 aaKnown RBP12.38□□□□□ -0.43
CDH2-201ENST00000269141 FAM205CA6NFA0 338 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 CCDC40Q4G0X9 1142 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 HDXQ7Z353 690 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 CSRNP2Q9H175 543 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 PLEKHG2Q9H7P9 1386 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 FLT1P17948 1338 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 KIF28PB7ZC32 967 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 ZSCAN12O43309 604 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 FLOT1O75955 427 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 LAMB3Q13751 1172 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 PRR16Q569H4 304 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 TRIM42Q8IWZ5 723 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 MIEF2Q96C03 454 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 TRIM11Q96F44 468 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 TACO1Q9BSH4 297 aaKnown RBP12.38□□□□□ -0.43
CDH2-201ENST00000269141 CTDNEP1O95476 244 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 PCP11498 1178 aaKnown RBP12.38□□□□□ -0.43
CDH2-201ENST00000269141 DNA2P51530 1060 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 GNG11P61952 73 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 KARSQ15046 597 aaKnown RBP12.38□□□□□ -0.43
CDH2-201ENST00000269141 CALCRLQ16602 461 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 EHMT1Q9H9B1 1298 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 DESP17661 470 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 TNFAIP1Q13829 316 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 SLC39A14Q15043 492 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 GET4Q7L5D6 327 aaPredicted RBP12.38□□□□□ -0.43
CDH2-201ENST00000269141 KRT25Q7Z3Z0 450 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 EPSTI1Q96J88 318 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 RIOK1Q9BRS2 568 aaKnown RBP12.38□□□□□ -0.43
CDH2-201ENST00000269141 PAGR1Q9BTK6 254 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 PDGFDQ9GZP0 370 aaPredicted RBP12.38□□□□□ -0.43
CDH2-201ENST00000269141 SH2D4AQ9H788 454 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 KANSL2Q9H9L4 492 aa12.38□□□□□ -0.43
CDH2-201ENST00000269141 RFX7Q2KHR2 1363 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 PPP1R12BO60237 982 aaPredicted RBP12.37□□□□□ -0.43
CDH2-201ENST00000269141 POLE2P56282 527 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 ODF2Q5BJF6 829 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 CDC42EP5Q6NZY7 148 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 B4GALNT4Q76KP1 1039 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 DGKHQ86XP1 1220 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 RTEL1Q9NZ71 1219 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 CASP1P29466 404 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 HOXA13P31271 388 aaPredicted RBP12.37□□□□□ -0.43
CDH2-201ENST00000269141 CYP4A11Q02928 519 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 MKRN3Q13064 507 aaKnown RBP12.37□□□□□ -0.43
CDH2-201ENST00000269141 POSTNQ15063 836 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 CAPRIN2Q6IMN6 1127 aaKnown RBP12.37□□□□□ -0.43
CDH2-201ENST00000269141 CCDC50Q8IVM0 306 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 CCDC17Q96LX7 622 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 FRMD4BQ9Y2L6 1034 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 FAM170AA1A519 330 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 CREB3O43889 395 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 TBCAO75347 108 aaKnown RBP12.37□□□□□ -0.43
CDH2-201ENST00000269141 ZNF189O75820 626 aaPredicted RBP12.37□□□□□ -0.43
CDH2-201ENST00000269141 FDPSP14324 419 aaKnown RBP12.37□□□□□ -0.43
CDH2-201ENST00000269141 TTBK2Q6IQ55 1244 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 FBXO11Q86XK2 927 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 SYCP3Q8IZU3 236 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 ERMNQ8TAM6 284 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 SYMPKQ92797 1274 aaKnown RBP12.37□□□□□ -0.43
CDH2-201ENST00000269141 KIAA1468Q9P260 1216 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 RCOR1Q9UKL0 485 aa12.37□□□□□ -0.43
CDH2-201ENST00000269141 CACNA1FO60840 1977 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 MRC1P22897 1456 aa12.36□□□□□ -0.43
CDH2-201ENST00000269141 HNRNPH1P31943 449 aaKnown RBP12.36□□□□□ -0.43
CDH2-201ENST00000269141 SNCBQ16143 134 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms