RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 GJD4Q96KN9 370 aaPredicted RBP12.17□□□□□ -0.46
TCTN3-201ENST00000265993 CNOT6LQ96LI5 555 aaKnown RBP12.17□□□□□ -0.46
TCTN3-201ENST00000265993 MTMR4Q9NYA4 1195 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 TTF2Q9UNY4 1162 aaKnown RBP12.17□□□□□ -0.46
TCTN3-201ENST00000265993 PCDHAC2Q9Y5I4 1007 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 PRPHP41219 470 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 CYP27A1Q02318 531 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 UBR3Q6ZT12 1888 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 KCTD1Q719H9 257 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 KCNK18Q7Z418 384 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 SRGAP1Q7Z6B7 1085 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 OR8K1Q8NGG5 319 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 P2RX5Q93086 422 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 RBM17Q96I25 401 aaKnown RBP12.17□□□□□ -0.46
TCTN3-201ENST00000265993 PCMTD1Q96MG8 357 aaPredicted RBP12.17□□□□□ -0.46
TCTN3-201ENST00000265993 ANKZF1Q9H8Y5 726 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 MAGEC2Q9UBF1 373 aaPredicted RBP12.17□□□□□ -0.46
TCTN3-201ENST00000265993 DUSP10Q9Y6W6 482 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 PPP1R11O60927 126 aaPredicted RBP12.17□□□□□ -0.46
TCTN3-201ENST00000265993 SRGAP2O75044 1071 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 IDEP14735 1019 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 GYS2P54840 703 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 GABPB1Q06547 395 aaPredicted RBP12.17□□□□□ -0.46
TCTN3-201ENST00000265993 TBC1D8BQ0IIM8 1120 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 GRB10Q13322 594 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 TMED8Q6PL24 325 aaPredicted RBP12.17□□□□□ -0.46
TCTN3-201ENST00000265993 SEPT12Q8IYM1 358 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 NOA1Q8NC60 698 aaKnown RBP12.17□□□□□ -0.46
TCTN3-201ENST00000265993 CERKQ8TCT0 537 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 RABGGTAQ92696 567 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 KCNQ5Q9NR82 932 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 BLOC1S4Q9NUP1 217 aa12.17□□□□□ -0.46
TCTN3-201ENST00000265993 SMCHD1A6NHR9 2005 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 GAKO14976 1311 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 MYMKA6NI61 221 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 LAD1O00515 517 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 PLEKP08567 350 aaPredicted RBP12.16□□□□□ -0.46
TCTN3-201ENST00000265993 EEF1GP26641 437 aaKnown RBP12.16□□□□□ -0.46
TCTN3-201ENST00000265993 MTIF2P46199 727 aaKnown RBP12.16□□□□□ -0.46
TCTN3-201ENST00000265993 NFIAQ12857 509 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 LRRC41Q15345 812 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 CALCRLQ16602 461 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 C15orf52Q6ZUT6 534 aaKnown RBP12.16□□□□□ -0.46
TCTN3-201ENST00000265993 LZTS2Q9BRK4 669 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 LACRTQ9GZZ8 138 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 SEMA6BQ9H3T3 888 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 LRWD1Q9UFC0 647 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 MPHOSPH10O00566 681 aaKnown RBP12.16□□□□□ -0.46
TCTN3-201ENST00000265993 EPHB6O15197 1021 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 HERVK_113P62684 666 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 ECM1Q16610 540 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
TCTN3-201ENST00000265993 ZFPM1Q8IX07 1006 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 PNMA5Q96PV4 448 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 NAPGQ99747 312 aaPredicted RBP12.16□□□□□ -0.46
TCTN3-201ENST00000265993 NOC4LQ9BVI4 516 aaKnown RBP12.16□□□□□ -0.46
TCTN3-201ENST00000265993 THAP9Q9H5L6 903 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 RIOX1Q9H6W3 641 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 ARFGAP3Q9NP61 516 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 THSD7AQ9UPZ6 1657 aa12.16□□□□□ -0.46
TCTN3-201ENST00000265993 MYH4Q9Y623 1939 aa12.15□□□□□ -0.46
TCTN3-201ENST00000265993 PLCG2P16885 1265 aa12.15□□□□□ -0.46
TCTN3-201ENST00000265993 CCNE1P24864 410 aa12.15□□□□□ -0.46
TCTN3-201ENST00000265993 MIIPQ5JXC2 388 aa12.15□□□□□ -0.46
TCTN3-201ENST00000265993 KRT26Q7Z3Y9 468 aa12.15□□□□□ -0.46
TCTN3-201ENST00000265993 AK8Q96MA6 479 aa12.15□□□□□ -0.46
TCTN3-201ENST00000265993 TRIM37O94972 964 aa12.15□□□□□ -0.47
TCTN3-201ENST00000265993 TCP10Q12799 353 aa12.15□□□□□ -0.47
TCTN3-201ENST00000265993 TRIM14Q14142 442 aa12.15□□□□□ -0.47
TCTN3-201ENST00000265993 CCDC122Q5T0U0 273 aa12.15□□□□□ -0.47
TCTN3-201ENST00000265993 ADGRF4Q8IZF3 695 aa12.15□□□□□ -0.47
TCTN3-201ENST00000265993 CCDC155Q8N6L0 562 aa12.15□□□□□ -0.47
TCTN3-201ENST00000265993 CALML4Q96GE6 196 aa12.15□□□□□ -0.47
TCTN3-201ENST00000265993 MTMR9Q96QG7 549 aa12.15□□□□□ -0.47
TCTN3-201ENST00000265993 DNAJC7Q99615 494 aa12.15□□□□□ -0.47
TCTN3-201ENST00000265993 FUT8Q9BYC5 575 aa12.15□□□□□ -0.47
TCTN3-201ENST00000265993 FAM207AQ9NSI2 230 aaPredicted RBP12.15□□□□□ -0.47
TCTN3-201ENST00000265993 CAPN11Q9UMQ6 739 aa12.15□□□□□ -0.47
TCTN3-201ENST00000265993 USP17L10C9JJH3 530 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 POLRMTO00411 1230 aaKnown RBP12.14□□□□□ -0.47
TCTN3-201ENST00000265993 SRGNP10124 158 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 DNM2P50570 870 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 ADCY7P51828 1080 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
TCTN3-201ENST00000265993 GABPAQ06546 454 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 RAD51AP2Q09MP3 1159 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 LONRF2Q1L5Z9 754 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
TCTN3-201ENST00000265993 CAPZA3Q96KX2 299 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 C7orf25Q9BPX7 421 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 HINFPQ9BQA5 517 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 TTYH3Q9C0H2 523 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 JMJD4Q9H9V9 463 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 BBOX1O75936 387 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 ATP1A1P05023 1023 aaKnown RBP12.14□□□□□ -0.47
TCTN3-201ENST00000265993 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
TCTN3-201ENST00000265993 CCDC96Q2M329 555 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 SNX29Q8TEQ0 813 aa12.14□□□□□ -0.47
TCTN3-201ENST00000265993 SMCR8Q8TEV9 937 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms