RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 EGFRP00533 1210 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 PTGS1P23219 599 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 IRX3P78415 501 aaPredicted RBP10.46□□□□□ -0.73
SSR3-201ENST00000265044 C9orf131Q5VYM1 1079 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 HAUS3Q68CZ6 603 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 PRPF38AQ8NAV1 312 aaKnown RBP10.46□□□□□ -0.73
SSR3-201ENST00000265044 EEF2KMTQ96G04 330 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 PAGE5Q96GU1 130 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 PRR29P0C7W0 189 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 ARHGAP4P98171 946 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 METTL16Q86W50 562 aaKnown RBP10.46□□□□□ -0.73
SSR3-201ENST00000265044 PLA2G4DQ86XP0 818 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 GJA10Q969M2 543 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 SLF1Q9BQI6 1058 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 FEM1BQ9UK73 627 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 TMX2Q9Y320 296 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 A0A1W2PRG0 241 aa10.46□□□□□ -0.74
SSR3-201ENST00000265044 NPM3O75607 178 aaKnown RBP10.46□□□□□ -0.74
SSR3-201ENST00000265044 GCFC2P16383 781 aaKnown RBP10.46□□□□□ -0.74
SSR3-201ENST00000265044 PLCG1P19174 1290 aa10.46□□□□□ -0.74
SSR3-201ENST00000265044 ZNF75DP51815 510 aa10.46□□□□□ -0.74
SSR3-201ENST00000265044 FKBP1CQ5VVH2 108 aa10.46□□□□□ -0.74
SSR3-201ENST00000265044 PPP1R18Q6NYC8 613 aa10.46□□□□□ -0.74
SSR3-201ENST00000265044 TATDN1Q6P1N9 297 aa10.46□□□□□ -0.74
SSR3-201ENST00000265044 AK8Q96MA6 479 aa10.46□□□□□ -0.74
SSR3-201ENST00000265044 DISC1Q9NRI5 854 aa10.46□□□□□ -0.74
SSR3-201ENST00000265044 FANCLQ9NW38 375 aa10.46□□□□□ -0.74
SSR3-201ENST00000265044 MAN1B1Q9UKM7 699 aa10.46□□□□□ -0.74
SSR3-201ENST00000265044 CACNA1SQ13698 1873 aa10.46□□□□□ -0.74
SSR3-201ENST00000265044 ASTN2O75129 1339 aaPredicted RBP10.45□□□□□ -0.74
SSR3-201ENST00000265044 TESPA1A2RU30 521 aaPredicted RBP10.45□□□□□ -0.74
SSR3-201ENST00000265044 GTPBP6O43824 516 aaPredicted RBP10.45□□□□□ -0.74
SSR3-201ENST00000265044 GAS7O60861 476 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 MTIF2P46199 727 aaKnown RBP10.45□□□□□ -0.74
SSR3-201ENST00000265044 FANCCQ00597 558 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 MCTP2Q6DN12 878 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 LDHDQ86WU2 507 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 PPP1R9BQ96SB3 815 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 GLIS2Q9BZE0 524 aaPredicted RBP10.45□□□□□ -0.74
SSR3-201ENST00000265044 TBC1D7Q9P0N9 293 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 KIAA1024Q9UPX6 916 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 C10orf71Q711Q0 1435 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 TBCAO75347 108 aaKnown RBP10.45□□□□□ -0.74
SSR3-201ENST00000265044 TPH2Q8IWU9 490 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 ZNF526Q8TF50 670 aaPredicted RBP10.45□□□□□ -0.74
SSR3-201ENST00000265044 RPAP3Q9H6T3 665 aaPredicted RBP10.45□□□□□ -0.74
SSR3-201ENST00000265044 WNT7AO00755 349 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 CTNND1O60716 968 aaKnown RBP10.45□□□□□ -0.74
SSR3-201ENST00000265044 MCF2L2Q86YR7 1114 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 SLFN12Q8IYM2 578 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 GSDMAQ96QA5 445 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 TSG101Q99816 390 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 DUOX1Q9NRD9 1551 aa10.45□□□□□ -0.74
SSR3-201ENST00000265044 ESYT2A0FGR8 921 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 RPN1P04843 607 aaKnown RBP10.44□□□□□ -0.74
SSR3-201ENST00000265044 ERCC3P19447 782 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 GRM1Q13255 1194 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 AP3B2Q13367 1082 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 CUL4BQ13620 913 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 MKL1Q969V6 931 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 GMCL1Q96IK5 515 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 SYT17Q9BSW7 474 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 XPO4Q9C0E2 1151 aaKnown RBP10.44□□□□□ -0.74
SSR3-201ENST00000265044 DNM3Q9UQ16 869 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 ZKSCAN5Q9Y2L8 839 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.44□□□□□ -0.741e-6■■□□□ 13.7
SSR3-201ENST00000265044 SYNRGQ9UMZ2 1314 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 EIF2AK2P19525 551 aaKnown RBP10.44□□□□□ -0.74
SSR3-201ENST00000265044 PAK1Q13153 545 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 HERC4Q5GLZ8 1057 aaPredicted RBP10.44□□□□□ -0.74
SSR3-201ENST00000265044 ARHGEF16Q5VV41 709 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 GPC2Q8N158 579 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 DAGLBQ8NCG7 672 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 GMLQ99445 158 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 NT5C3AQ9H0P0 336 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 ZNF541Q9H0D2 1346 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 LAMB2P55268 1798 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 IREB2P48200 963 aaKnown RBP10.44□□□□□ -0.74
SSR3-201ENST00000265044 MCM6Q14566 821 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 TRIML1Q8N9V2 468 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 ZNF280CQ8ND82 737 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 GMCL1P1Q8NEA9 526 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 TRPM4Q8TD43 1214 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 GPRC5DQ9NZD1 345 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 R3HCC1Q9Y3T6 440 aaKnown RBP10.44□□□□□ -0.74
SSR3-201ENST00000265044 CHD4Q14839 1912 aa10.44□□□□□ -0.74
SSR3-201ENST00000265044 COL24A1Q17RW2 1714 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 MEIS1O00470 390 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 IPO7O95373 1038 aaKnown RBP10.43□□□□□ -0.74
SSR3-201ENST00000265044 LRCH2Q5VUJ6 765 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 MAEAQ7L5Y9 396 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 FAM177A1Q8N128 213 aaPredicted RBP10.43□□□□□ -0.74
SSR3-201ENST00000265044 ANKRD35Q8N283 1001 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 LARP4BQ92615 738 aaKnown RBP10.43□□□□□ -0.74
SSR3-201ENST00000265044 OTUD5Q96G74 571 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 AGBL1Q96MI9 1066 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 TRMT1Q9NXH9 659 aaKnown RBP10.43□□□□□ -0.74
SSR3-201ENST00000265044 HPSEQ9Y251 543 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 SNED1Q8TER0 1413 aa10.43□□□□□ -0.74
SSR3-201ENST00000265044 ZBTB22O15209 634 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms