RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 DHX9Q08211 1270 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 LIN9Q5TKA1 542 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 NHEJ1Q9H9Q4 299 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 EPB41L5Q9HCM4 733 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 ARMCX3Q9UH62 379 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 RABGAP1Q9Y3P9 1069 aa12.79□□□□□ -0.36
DNMT3A-201ENST00000264709 FGAP02671 866 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 HPCAL4Q9UM19 191 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 MYH1P12882 1939 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 MYH2Q9UKX2 1941 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 MYH4Q9Y623 1939 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 PTPREP23469 700 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 ANKRD35Q8N283 1001 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 ZBTB3Q9H5J0 574 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 ZCCHC17Q9NP64 241 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 ANGPTL2Q9UKU9 493 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 MBD4O95243 580 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 SEPT14Q6ZU15 432 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 FBLN1P23142 703 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 PSMD2Q13200 908 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 GRAMD1AQ96CP6 724 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 DDX27Q96GQ7 796 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 SLITRK6Q9H5Y7 841 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 H2AFZP0C0S5 128 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 H2AFVQ71UI9 128 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 PODXLO00592 558 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 MRPS35P82673 323 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 IWS1Q96ST2 819 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 SPDYE3A6NKU9 549 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 BEND6Q5SZJ8 279 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 PIK3AP1Q6ZUJ8 805 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 RSRC2Q7L4I2 434 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 NLRP14Q86W24 1093 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 MYOCDQ8IZQ8 938 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 ACRBPQ8NEB7 543 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 ZKSCAN3Q9BRR0 538 aa12.78□□□□□ -0.36
DNMT3A-201ENST00000264709 KIF11P52732 1056 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 CAV1Q03135 178 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 FAM13AO94988 1023 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 PPP2R2AP63151 447 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 ARID5BQ14865 1188 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 TRIM68Q6AZZ1 485 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 LPIN2Q92539 896 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 CHMP6Q96FZ7 201 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 RAB21Q9UL25 225 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 DAAM1Q9Y4D1 1078 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 PARP1P09874 1014 aaKnown RBP12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 RASIP1Q5U651 963 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 TMEM51Q9NW97 253 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 KCNG1Q9UIX4 513 aa12.77□□□□□ -0.36
DNMT3A-201ENST00000264709 RASSF10A6NK89 507 aa12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 SMIM23A6NLE4 172 aa12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 CFAP157Q5JU67 520 aa12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 NME8Q8N427 588 aa12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 PSMD1Q99460 953 aa12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 GOLGA8QA0A0J9YX86 632 aa12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 GOLGA8OA6NCC3 632 aa12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 GOLGA8NF8WBI6 632 aa12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 CNOT6LQ96LI5 555 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 CCND1P24385 295 aa12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 HVCN1Q96D96 273 aa12.77□□□□□ -0.37
DNMT3A-201ENST00000264709 MIF4GDA9UHW6 222 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 EHHADHQ08426 723 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 SLC30A9Q6PML9 568 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 V9GY48 417 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 SCG2P13521 617 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 USPL1Q5W0Q7 1092 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 PPCSQ9HAB8 311 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 LRWD1Q9UFC0 647 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 SSX2IPQ9Y2D8 614 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 SAMM50Q9Y512 469 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 KRT15P19012 456 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 AARSP49588 968 aaKnown RBP eCLIP12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 CALCRLQ16602 461 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 CCDC85AQ96PX6 553 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 PFDN1O60925 122 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 TAF11Q15544 211 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 P2RX5Q93086 422 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 FAM81BQ96LP2 452 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 USP40Q9NVE5 1235 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 BTBD18B2RXH4 712 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 TULP2O00295 520 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 MMEP08473 750 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 RWDD2BP57060 319 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 PTGDRQ13258 359 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 ZNF589Q86UQ0 364 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 SLC17A8Q8NDX2 589 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 DENND2AQ9ULE3 1009 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 PLA2G4AP47712 749 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 PDCLQ13371 301 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 TAF1DQ9H5J8 278 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 OTUD7BQ6GQQ9 843 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 STAMBPL1Q96FJ0 436 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms