RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 RAD50Q92878 1312 aa10.58□□□□□ -0.71
LCN1-201ENST00000263598 MCM3APO60318 1980 aa10.58□□□□□ -0.72
LCN1-201ENST00000263598 GTPBP6O43824 516 aaPredicted RBP10.58□□□□□ -0.72
LCN1-201ENST00000263598 RANBP6O60518 1105 aaKnown RBP10.58□□□□□ -0.72
LCN1-201ENST00000263598 MYOGP15173 224 aa10.58□□□□□ -0.72
LCN1-201ENST00000263598 ALDH5A1P51649 535 aaPredicted RBP10.58□□□□□ -0.72
LCN1-201ENST00000263598 PURAQ00577 322 aaKnown RBP10.58□□□□□ -0.72
LCN1-201ENST00000263598 BAATQ14032 418 aaPredicted RBP10.58□□□□□ -0.72
LCN1-201ENST00000263598 ZMYM1Q5SVZ6 1142 aa10.58□□□□□ -0.72
LCN1-201ENST00000263598 C20orf194Q5TEA3 1177 aa10.58□□□□□ -0.72
LCN1-201ENST00000263598 DCAF4Q8WV16 495 aa10.58□□□□□ -0.72
LCN1-201ENST00000263598 MPHOSPH6Q99547 160 aaKnown RBP10.58□□□□□ -0.72
LCN1-201ENST00000263598 MTG1Q9BT17 334 aaPredicted RBP10.58□□□□□ -0.72
LCN1-201ENST00000263598 RANBP17Q9H2T7 1088 aaKnown RBP10.58□□□□□ -0.72
LCN1-201ENST00000263598 IL17RBQ9NRM6 502 aa10.58□□□□□ -0.72
LCN1-201ENST00000263598 TRMT13Q9NUP7 481 aaKnown RBP10.58□□□□□ -0.72
LCN1-201ENST00000263598 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.58□□□□□ -0.72
LCN1-201ENST00000263598 PTPDC1A2A3K4 754 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 NMT2O60551 498 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 KPNA6O60684 536 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 MYL3P08590 195 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 CYP2C9P11712 490 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 RFC2P35250 354 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 CTDSPL2Q05D32 466 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 TTLL4Q14679 1199 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 FAM47CQ5HY64 1035 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 TMEM63BQ5T3F8 832 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 DEFB128Q7Z7B8 93 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 RETREG2Q8NC44 543 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 OR6J1Q8NGC5 347 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 PHOSPHO2Q8TCD6 241 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 PI4K2BQ8TCG2 481 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 PURBQ96QR8 312 aaKnown RBP10.57□□□□□ -0.72
LCN1-201ENST00000263598 SLC9A7Q96T83 725 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 C1QTNF1Q9BXJ1 281 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 PNMA2Q9UL42 364 aa10.57□□□□□ -0.72
LCN1-201ENST00000263598 XIRP2A4UGR9 3374 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 LRRC37A2A6NM11 1700 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 RBM47A0AV96 593 aaKnown RBP10.56□□□□□ -0.72
LCN1-201ENST00000263598 B4DLN1 442 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 KIF28PB7ZC32 967 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 PITPNM1O00562 1244 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 NFIBO00712 420 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 NKRFO15226 690 aaKnown RBP eCLIP10.56□□□□□ -0.72
LCN1-201ENST00000263598 CA3P07451 260 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 BMP1P13497 986 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 POU3F3P20264 500 aaPredicted RBP10.56□□□□□ -0.72
LCN1-201ENST00000263598 CALML3P27482 149 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 SLC16A2P36021 539 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 NOVP48745 357 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 MRPL12P52815 198 aaKnown RBP10.56□□□□□ -0.72
LCN1-201ENST00000263598 PDE4DQ08499 809 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 BFSP2Q13515 415 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 PPP2R5BQ15173 497 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 NBPF20Q3BBV1 942 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 SYDE2Q5VT97 1194 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 NFRKBQ6P4R8 1299 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 BTNL9Q6UXG8 535 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 VWCEQ96DN2 955 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 FTOQ9C0B1 505 aaKnown RBP eCLIP10.56□□□□□ -0.72
LCN1-201ENST00000263598 INCENPQ9NQS7 918 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 TOMM22Q9NS69 142 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 NOD1Q9Y239 953 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 MTCH2Q9Y6C9 303 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 CHD9Q3L8U1 2897 aa10.56□□□□□ -0.72
LCN1-201ENST00000263598 TTC28Q96AY4 2481 aa10.55□□□□□ -0.72
LCN1-201ENST00000263598 ORC4O43929 436 aa10.55□□□□□ -0.72
LCN1-201ENST00000263598 IQCF3P0C7M6 154 aa10.55□□□□□ -0.72
LCN1-201ENST00000263598 TOP1P11387 765 aaKnown RBP10.55□□□□□ -0.72
LCN1-201ENST00000263598 TFF2Q03403 129 aa10.55□□□□□ -0.72
LCN1-201ENST00000263598 PTPN11Q06124 597 aaPredicted RBP10.55□□□□□ -0.72
LCN1-201ENST00000263598 DIEXFQ68CQ4 756 aaKnown RBP10.55□□□□□ -0.72
LCN1-201ENST00000263598 TTBK2Q6IQ55 1244 aa10.55□□□□□ -0.72
LCN1-201ENST00000263598 RNF207Q6ZRF8 634 aa10.55□□□□□ -0.72
LCN1-201ENST00000263598 RASGRP2Q7LDG7 609 aa10.55□□□□□ -0.72
LCN1-201ENST00000263598 DNERQ8NFT8 737 aa10.55□□□□□ -0.72
LCN1-201ENST00000263598 SCFD2Q8WU76 684 aa10.55□□□□□ -0.72
LCN1-201ENST00000263598 FAM122AQ96E09 287 aa10.55□□□□□ -0.72
LCN1-201ENST00000263598 NECAB3Q96P71 396 aaPredicted RBP10.55□□□□□ -0.72
LCN1-201ENST00000263598 COG5Q9UP83 839 aa10.55□□□□□ -0.72
LCN1-201ENST00000263598 FRMPD2Q68DX3 1309 aaPredicted RBP10.55□□□□□ -0.72
LCN1-201ENST00000263598 A6NJR5 290 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 RFXAPO00287 272 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 FOXP2O15409 715 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 BAIAP3O94812 1187 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 MX1P20591 662 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 PLA2G5P39877 138 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 KCNQ1P51787 676 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 RRP12Q5JTH9 1297 aaKnown RBP10.54□□□□□ -0.72
LCN1-201ENST00000263598 SLC30A10Q6XR72 485 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 HERC6Q8IVU3 1022 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 CCDC155Q8N6L0 562 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 CLEC4DQ8WXI8 215 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 ARNTL2Q8WYA1 636 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 TMEM47Q9BQJ4 181 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 CERS4Q9HA82 394 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 GPCPD1Q9NPB8 672 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 TCP11L1Q9NUJ3 509 aa10.54□□□□□ -0.72
LCN1-201ENST00000263598 ZBTB47Q9UFB7 747 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms