RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 TNFRSF25Q93038 417 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 GLT8D2Q9H1C3 349 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 BRMS1Q9HCU9 246 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 TMEM260Q9NX78 707 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 BIN2Q9UBW5 565 aaPredicted RBP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 PCDHA6Q9UN73 950 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 PCDHA8Q9Y5H6 950 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 GCOM1H8Y6P7 765 aaPredicted RBP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 BRD1O95696 1058 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 POLR2MP0CAP2 368 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 PDIA4P13667 645 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 RPS6P62753 249 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 MAP2K1Q02750 393 aaPredicted RBP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 NOM1Q5C9Z4 860 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 FOXD4L5Q5VV16 416 aaPredicted RBP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 RNF207Q6ZRF8 634 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 FERMT3Q86UX7 667 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 REXO1Q8N1G1 1221 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 FOXD4L4Q8WXT5 416 aaPredicted RBP18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 CYP39A1Q9NYL5 469 aa18.12■□□□□ 0.49
CCDC90B-201ENST00000260054 ECM2O94769 699 aaPredicted RBP18.11■□□□□ 0.49
CCDC90B-201ENST00000260054 ZSCAN22P10073 491 aaPredicted RBP18.11■□□□□ 0.49
CCDC90B-201ENST00000260054 U2AF2P26368 475 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCDC90B-201ENST00000260054 BAATQ14032 418 aaPredicted RBP18.11■□□□□ 0.49
CCDC90B-201ENST00000260054 EARS2Q5JPH6 523 aaKnown RBP18.11■□□□□ 0.49
CCDC90B-201ENST00000260054 JAKMIP3Q5VZ66 844 aa18.11■□□□□ 0.49
CCDC90B-201ENST00000260054 CCAR1Q8IX12 1150 aaKnown RBP18.11■□□□□ 0.49
CCDC90B-201ENST00000260054 FOXP1Q9H334 677 aaPredicted RBP18.11■□□□□ 0.49
CCDC90B-201ENST00000260054 SAGE1Q9NXZ1 904 aa18.11■□□□□ 0.49
CCDC90B-201ENST00000260054 COL20A1Q9P218 1284 aa18.11■□□□□ 0.49
CCDC90B-201ENST00000260054 CIZ1Q9ULV3 898 aaPredicted RBP18.11■□□□□ 0.49
CCDC90B-201ENST00000260054 RBBP6Q7Z6E9 1792 aaKnown RBP18.1■□□□□ 0.49
CCDC90B-201ENST00000260054 MAPK4P31152 587 aa18.1■□□□□ 0.49
CCDC90B-201ENST00000260054 GPR142Q7Z601 462 aa18.1■□□□□ 0.49
CCDC90B-201ENST00000260054 ANKRD35Q8N283 1001 aa18.1■□□□□ 0.49
CCDC90B-201ENST00000260054 SAMD3Q8N6K7 520 aa18.1■□□□□ 0.49
CCDC90B-201ENST00000260054 SYTL5Q8TDW5 730 aaPredicted RBP18.1■□□□□ 0.49
CCDC90B-201ENST00000260054 PGBD1Q96JS3 809 aa18.1■□□□□ 0.49
CCDC90B-201ENST00000260054 FAM205CA6NFA0 338 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 CTGFP29279 349 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 NUCB2P80303 420 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 RESTQ13127 1097 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 FCHSD1Q86WN1 690 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 TEX2Q8IWB9 1127 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 PURBQ96QR8 312 aaKnown RBP18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 MMP19Q99542 508 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 MAP3K20Q9NYL2 800 aaKnown RBP18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 CHMP5Q9NZZ3 219 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 F13A1P00488 732 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 FCER1AP12319 257 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 GNL2Q13823 731 aaKnown RBP18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 NOSTRINQ8IVI9 506 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 MAF1Q9H063 256 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 WBP1LQ9NX94 342 aa18.09■□□□□ 0.49
CCDC90B-201ENST00000260054 PFASO15067 1338 aa18.08■□□□□ 0.49
CCDC90B-201ENST00000260054 LACTBP83111 547 aaPredicted RBP18.08■□□□□ 0.48
CCDC90B-201ENST00000260054 SP3Q02447 781 aa18.08■□□□□ 0.48
CCDC90B-201ENST00000260054 AP3B2Q13367 1082 aa18.08■□□□□ 0.48
CCDC90B-201ENST00000260054 KCTD2Q14681 263 aa18.08■□□□□ 0.48
CCDC90B-201ENST00000260054 PIK3AP1Q6ZUJ8 805 aa18.08■□□□□ 0.48
CCDC90B-201ENST00000260054 PLEKHH3Q7Z736 793 aa18.08■□□□□ 0.48
CCDC90B-201ENST00000260054 ANO3Q9BYT9 981 aa18.08■□□□□ 0.48
CCDC90B-201ENST00000260054 ARHGAP39Q9C0H5 1083 aa18.08■□□□□ 0.48
CCDC90B-201ENST00000260054 IVNS1ABPQ9Y6Y0 642 aa18.08■□□□□ 0.48
CCDC90B-201ENST00000260054 SPDYE3A6NKU9 549 aa18.07■□□□□ 0.48
CCDC90B-201ENST00000260054 GPR25O00155 361 aa18.07■□□□□ 0.48
CCDC90B-201ENST00000260054 STRNO43815 780 aa18.07■□□□□ 0.48
CCDC90B-201ENST00000260054 PGK2P07205 417 aa18.07■□□□□ 0.48
CCDC90B-201ENST00000260054 PTPREP23469 700 aa18.07■□□□□ 0.48
CCDC90B-201ENST00000260054 CNTN2Q02246 1040 aa18.07■□□□□ 0.48
CCDC90B-201ENST00000260054 KRT25Q7Z3Z0 450 aa18.07■□□□□ 0.48
CCDC90B-201ENST00000260054 TAAR1Q96RJ0 339 aa18.07■□□□□ 0.48
CCDC90B-201ENST00000260054 BEGAINQ9BUH8 593 aa18.07■□□□□ 0.48
CCDC90B-201ENST00000260054 TSKSQ9UJT2 592 aa18.07■□□□□ 0.48
CCDC90B-201ENST00000260054 PLXNB2O15031 1838 aa18.07■□□□□ 0.48
CCDC90B-201ENST00000260054 DNAJC25-GNG10A0A024R161 153 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 CCDC194A0A1B0GVG4 234 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 FOSP01100 380 aaPredicted RBP18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 ADORA2AP29274 412 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 CAP1Q01518 475 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 GRB14Q14449 540 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 FAM173BQ6P4H8 233 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 ABRAQ8N0Z2 381 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 ZSCAN16Q9H4T2 348 aaPredicted RBP18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 LCTP09848 1927 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 NONOQ15233 471 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 MCTP2Q6DN12 878 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 BRAPQ7Z569 592 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 FAM133AQ8N9E0 248 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 ASTN1O14525 1302 aa18.06■□□□□ 0.48
CCDC90B-201ENST00000260054 ZSWIM8A7E2V4 1837 aa18.05■□□□□ 0.48
CCDC90B-201ENST00000260054 RPTORQ8N122 1335 aa18.05■□□□□ 0.48
CCDC90B-201ENST00000260054 POTEB2H3BUK9 544 aa18.05■□□□□ 0.48
CCDC90B-201ENST00000260054 TNPO2O14787 897 aaKnown RBP18.05■□□□□ 0.48
CCDC90B-201ENST00000260054 COBLO75128 1261 aa18.05■□□□□ 0.48
CCDC90B-201ENST00000260054 PSMC4P43686 418 aa18.05■□□□□ 0.48
CCDC90B-201ENST00000260054 INF2Q27J81 1249 aa18.05■□□□□ 0.48
CCDC90B-201ENST00000260054 TBCKQ8TEA7 893 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms