RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 RCAN3Q9UKA8 241 aa11.91□□□□□ -0.5
GCM1-201ENST00000259803 TMEM247A6NEH6 219 aa11.91□□□□□ -0.5
GCM1-201ENST00000259803 PENKP01210 267 aaPredicted RBP11.91□□□□□ -0.5
GCM1-201ENST00000259803 SNRPA1P09661 255 aaKnown RBP11.91□□□□□ -0.5
GCM1-201ENST00000259803 TNNI2P48788 182 aa11.91□□□□□ -0.5
GCM1-201ENST00000259803 CLCN6P51797 869 aa11.91□□□□□ -0.5
GCM1-201ENST00000259803 SNX16P57768 344 aa11.91□□□□□ -0.5
GCM1-201ENST00000259803 NLRP12P59046 1061 aa11.91□□□□□ -0.5
GCM1-201ENST00000259803 LRRFIP1Q32MZ4 808 aaKnown RBP11.91□□□□□ -0.5
GCM1-201ENST00000259803 FOXR1Q6PIV2 292 aa11.91□□□□□ -0.5
GCM1-201ENST00000259803 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
GCM1-201ENST00000259803 TSC22D3Q99576 134 aa11.91□□□□□ -0.5
GCM1-201ENST00000259803 AATFQ9NY61 560 aaKnown RBP eCLIP11.91□□□□□ -0.5
GCM1-201ENST00000259803 PRSS47A8MTI9 375 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 F6X3S4 739 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 M0QX08 132 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 FOXN3O00409 490 aaPredicted RBP11.9□□□□□ -0.5
GCM1-201ENST00000259803 LIN7AO14910 233 aaPredicted RBP11.9□□□□□ -0.5
GCM1-201ENST00000259803 PDIA6Q15084 440 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 CCDC38Q502W7 563 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 SDE2Q6IQ49 451 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 HOOK2Q96ED9 719 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 NR1H4Q96RI1 486 aaPredicted RBP11.9□□□□□ -0.5
GCM1-201ENST00000259803 UPF3BQ9BZI7 483 aaKnown RBP11.9□□□□□ -0.5
GCM1-201ENST00000259803 UBE4AQ14139 1066 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 SPECC1Q5M775 1068 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 CCDC50Q8IVM0 306 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 LRRC43Q8N309 656 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 HESX1Q9UBX0 185 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 FBXL5Q9UKA1 691 aa11.9□□□□□ -0.5
GCM1-201ENST00000259803 ZNF215Q9UL58 517 aaPredicted RBP11.9□□□□□ -0.5
GCM1-201ENST00000259803 VIMP08670 466 aaKnown RBP11.9□□□□□ -0.51
GCM1-201ENST00000259803 CD9P21926 228 aa11.9□□□□□ -0.51
GCM1-201ENST00000259803 SLC16A2P36021 539 aa11.9□□□□□ -0.51
GCM1-201ENST00000259803 CRKLP46109 303 aaKnown RBP11.9□□□□□ -0.51
GCM1-201ENST00000259803 BNIP1Q12981 228 aa11.9□□□□□ -0.51
GCM1-201ENST00000259803 GRAMD2AQ8IUY3 354 aa11.9□□□□□ -0.51
GCM1-201ENST00000259803 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.51
GCM1-201ENST00000259803 SH3KBP1Q96B97 665 aa11.9□□□□□ -0.51
GCM1-201ENST00000259803 C2CD2Q9Y426 696 aa11.9□□□□□ -0.51
GCM1-201ENST00000259803 B4DLN1 442 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 SNX2O60749 519 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 FOSP01100 380 aaPredicted RBP11.89□□□□□ -0.51
GCM1-201ENST00000259803 CYP19A1P11511 503 aaPredicted RBP11.89□□□□□ -0.51
GCM1-201ENST00000259803 SKIV2L2P42285 1042 aaKnown RBP11.89□□□□□ -0.51
GCM1-201ENST00000259803 UQCC2Q9BRT2 126 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 VCPKMTQ9H867 229 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 SLC39A2Q9NP94 309 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 GALNT8Q9NY28 637 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 MUSKO15146 869 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 TSPAN1O60635 241 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 TMCC1O94876 653 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 ZNF827Q17R98 1081 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 APLFQ8IW19 511 aaPredicted RBP11.89□□□□□ -0.51
GCM1-201ENST00000259803 GIMAP8Q8ND71 665 aaPredicted RBP11.89□□□□□ -0.51
GCM1-201ENST00000259803 CCDC110Q8TBZ0 833 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.89□□□□□ -0.51
GCM1-201ENST00000259803 PARVGQ9HBI0 331 aa11.89□□□□□ -0.51
GCM1-201ENST00000259803 KDM3BQ7LBC6 1761 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 C5P01031 1676 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 ANKRD65E5RJM6 399 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 TEX28O15482 410 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 SMNDC1O75940 238 aaKnown RBP eCLIP11.88□□□□□ -0.51
GCM1-201ENST00000259803 SMTNP53814 917 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 COG2Q14746 738 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 ACAP1Q15027 740 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 BEND6Q5SZJ8 279 aaPredicted RBP11.88□□□□□ -0.51
GCM1-201ENST00000259803 BEND5Q7L4P6 421 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 RASSF8Q8NHQ8 419 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 CCT7Q99832 543 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 YIPF3Q9GZM5 350 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 CCDC171Q6TFL3 1326 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 RASA4BC9J798 803 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 GNPATO15228 680 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 STAMBPO95630 424 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 GNAT1P11488 350 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 BPIFB3P59826 476 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 IKQ13123 557 aaPredicted RBP11.88□□□□□ -0.51
GCM1-201ENST00000259803 INTS5Q6P9B9 1019 aaKnown RBP11.88□□□□□ -0.51
GCM1-201ENST00000259803 GDAP1Q8TB36 358 aa11.88□□□□□ -0.51
GCM1-201ENST00000259803 NOB1Q9ULX3 412 aaKnown RBP11.88□□□□□ -0.51
GCM1-201ENST00000259803 NHSQ6T4R5 1651 aa11.87□□□□□ -0.51
GCM1-201ENST00000259803 SLU7O95391 586 aaKnown RBP11.87□□□□□ -0.51
GCM1-201ENST00000259803 PABPC1LQ4VXU2 614 aaKnown RBP11.87□□□□□ -0.51
GCM1-201ENST00000259803 SYT2Q8N9I0 419 aaPredicted RBP11.87□□□□□ -0.51
GCM1-201ENST00000259803 SLAIN1Q8ND83 568 aa11.87□□□□□ -0.51
GCM1-201ENST00000259803 TRPC4APQ8TEL6 797 aa11.87□□□□□ -0.51
GCM1-201ENST00000259803 CAMKK2Q96RR4 588 aa11.87□□□□□ -0.51
GCM1-201ENST00000259803 EIF2AQ9BY44 585 aaKnown RBP11.87□□□□□ -0.51
GCM1-201ENST00000259803 TYW1Q9NV66 732 aaKnown RBP11.87□□□□□ -0.51
GCM1-201ENST00000259803 EVLQ9UI08 416 aaPredicted RBP11.87□□□□□ -0.51
GCM1-201ENST00000259803 PCDHGB3Q9Y5G1 929 aa11.87□□□□□ -0.51
GCM1-201ENST00000259803 MYPNQ86TC9 1320 aa11.87□□□□□ -0.51
GCM1-201ENST00000259803 KCNJ13O60928 360 aa11.87□□□□□ -0.51
GCM1-201ENST00000259803 LDHBP07195 334 aaKnown RBP11.87□□□□□ -0.51
GCM1-201ENST00000259803 PCP11498 1178 aaKnown RBP11.87□□□□□ -0.51
GCM1-201ENST00000259803 HSPA4P34932 840 aa11.87□□□□□ -0.51
GCM1-201ENST00000259803 CENPAP49450 140 aa11.87□□□□□ -0.51
GCM1-201ENST00000259803 CEP85LQ5SZL2 805 aa11.87□□□□□ -0.51
GCM1-201ENST00000259803 RNF10Q8N5U6 811 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms