RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 DRC7Q8IY82 874 aa31.28■■■□□ 2.6
CCM2-201ENST00000258781 TMEM232C9JQI7 657 aa31.27■■■□□ 2.6
CCM2-201ENST00000258781 UBA7P41226 1012 aa31.27■■■□□ 2.6
CCM2-201ENST00000258781 UBE2SQ16763 222 aa31.27■■■□□ 2.6
CCM2-201ENST00000258781 KRT26Q7Z3Y9 468 aa31.27■■■□□ 2.6
CCM2-201ENST00000258781 AMNQ9BXJ7 453 aa31.27■■■□□ 2.6
CCM2-201ENST00000258781 ZNF341Q9BYN7 854 aa31.27■■■□□ 2.6
CCM2-201ENST00000258781 GLIS2Q9BZE0 524 aaPredicted RBP31.27■■■□□ 2.6
CCM2-201ENST00000258781 ZC3H15Q8WU90 426 aaKnown RBP31.27■■■□□ 2.6
CCM2-201ENST00000258781 GTPBP6O43824 516 aaPredicted RBP31.26■■■□□ 2.59
CCM2-201ENST00000258781 CTNND1O60716 968 aaKnown RBP31.26■■■□□ 2.59
CCM2-201ENST00000258781 STAT6P42226 847 aa31.26■■■□□ 2.59
CCM2-201ENST00000258781 PPP4R3AQ6IN85 833 aa31.26■■■□□ 2.59
CCM2-201ENST00000258781 HOOK2Q96ED9 719 aa31.26■■■□□ 2.59
CCM2-201ENST00000258781 SH2D4AQ9H788 454 aa31.26■■■□□ 2.59
CCM2-201ENST00000258781 ZNF112Q9UJU3 913 aa31.26■■■□□ 2.59
CCM2-201ENST00000258781 IKQ13123 557 aaPredicted RBP31.25■■■□□ 2.59
CCM2-201ENST00000258781 KARSQ15046 597 aaKnown RBP31.25■■■□□ 2.59
CCM2-201ENST00000258781 MCTP2Q6DN12 878 aa31.25■■■□□ 2.59
CCM2-201ENST00000258781 MTMR9Q96QG7 549 aa31.25■■■□□ 2.59
CCM2-201ENST00000258781 WRNIP1Q96S55 665 aa31.25■■■□□ 2.59
CCM2-201ENST00000258781 NAP1L4Q99733 375 aaKnown RBP31.25■■■□□ 2.59
CCM2-201ENST00000258781 EDIL3O43854 480 aa31.25■■■□□ 2.59
CCM2-201ENST00000258781 POTEDQ86YR6 584 aa31.25■■■□□ 2.59
CCM2-201ENST00000258781 POTEIP0CG38 1075 aa31.24■■■□□ 2.59
CCM2-201ENST00000258781 POTEJP0CG39 1038 aa31.24■■■□□ 2.59
CCM2-201ENST00000258781 CDC25AP30304 524 aa31.24■■■□□ 2.59
CCM2-201ENST00000258781 FBXO11Q86XK2 927 aa31.24■■■□□ 2.59
CCM2-201ENST00000258781 ZKSCAN4Q969J2 545 aaPredicted RBP31.24■■■□□ 2.59
CCM2-201ENST00000258781 HSD3B7Q9H2F3 369 aa31.24■■■□□ 2.59
CCM2-201ENST00000258781 PAPPA2Q9BXP8 1791 aa31.24■■■□□ 2.59
CCM2-201ENST00000258781 OTOFQ9HC10 1997 aa31.23■■■□□ 2.59
CCM2-201ENST00000258781 GCFC2P16383 781 aaKnown RBP31.23■■■□□ 2.59
CCM2-201ENST00000258781 CALCRLQ16602 461 aa31.23■■■□□ 2.59
CCM2-201ENST00000258781 SUPT20HL1Q3ZLR7 823 aa31.23■■■□□ 2.59
CCM2-201ENST00000258781 KIAA1755Q5JYT7 1200 aa31.23■■■□□ 2.59
CCM2-201ENST00000258781 RRAGBQ5VZM2 374 aa31.23■■■□□ 2.59
CCM2-201ENST00000258781 KLRG1Q96E93 195 aa31.23■■■□□ 2.59
CCM2-201ENST00000258781 CUEDC2Q9H467 287 aa31.23■■■□□ 2.59
CCM2-201ENST00000258781 TTC12Q9H892 705 aaPredicted RBP31.23■■■□□ 2.59
CCM2-201ENST00000258781 PP2D1A8MPX8 630 aa31.23■■■□□ 2.59
CCM2-201ENST00000258781 PRKG1Q13976 671 aa31.23■■■□□ 2.59
CCM2-201ENST00000258781 IGSF22Q8N9C0 903 aa31.23■■■□□ 2.59
CCM2-201ENST00000258781 MAGEF1Q9HAY2 307 aa31.23■■■□□ 2.59
CCM2-201ENST00000258781 ERCC5P28715 1186 aaPredicted RBP31.22■■■□□ 2.59
CCM2-201ENST00000258781 FXR2P51116 673 aaKnown RBP eCLIP31.22■■■□□ 2.59
CCM2-201ENST00000258781 TRAF1Q13077 416 aa31.22■■■□□ 2.59
CCM2-201ENST00000258781 AP3B2Q13367 1082 aa31.22■■■□□ 2.59
CCM2-201ENST00000258781 CABP7Q86V35 215 aa31.22■■■□□ 2.59
CCM2-201ENST00000258781 RASSF8Q8NHQ8 419 aa31.22■■■□□ 2.59
CCM2-201ENST00000258781 ENOX1Q8TC92 643 aaKnown RBP31.22■■■□□ 2.59
CCM2-201ENST00000258781 MTRQ99707 1265 aa31.22■■■□□ 2.59
CCM2-201ENST00000258781 VCPKMTQ9H867 229 aa31.22■■■□□ 2.59
CCM2-201ENST00000258781 TDP2O95551 362 aa31.21■■■□□ 2.59
CCM2-201ENST00000258781 MYL1P05976 194 aa31.21■■■□□ 2.59
CCM2-201ENST00000258781 STAT2P52630 851 aa31.21■■■□□ 2.59
CCM2-201ENST00000258781 SPICE1Q8N0Z3 855 aa31.21■■■□□ 2.59
CCM2-201ENST00000258781 PHIPQ8WWQ0 1821 aa31.21■■■□□ 2.59
CCM2-201ENST00000258781 ZNF830Q96NB3 372 aaPredicted RBP31.21■■■□□ 2.59
CCM2-201ENST00000258781 PRR12Q9ULL5 1215 aa31.21■■■□□ 2.59
CCM2-201ENST00000258781 NAALADL2Q58DX5 795 aa31.21■■■□□ 2.59
CCM2-201ENST00000258781 PNMA8AQ86V59 439 aaPredicted RBP31.21■■■□□ 2.59
CCM2-201ENST00000258781 TEX2Q8IWB9 1127 aa31.21■■■□□ 2.59
CCM2-201ENST00000258781 SLC37A4O43826 429 aa31.2■■■□□ 2.58
CCM2-201ENST00000258781 CASP1P29466 404 aa31.2■■■□□ 2.58
CCM2-201ENST00000258781 TMEM266Q2M3C6 531 aa31.2■■■□□ 2.58
CCM2-201ENST00000258781 CCDC186Q7Z3E2 898 aa31.2■■■□□ 2.58
CCM2-201ENST00000258781 SCYL3Q8IZE3 742 aa31.2■■■□□ 2.58
CCM2-201ENST00000258781 PLA2G6O60733 806 aa31.19■■■□□ 2.58
CCM2-201ENST00000258781 PTGS1P23219 599 aa31.19■■■□□ 2.58
CCM2-201ENST00000258781 ZYXQ15942 572 aaKnown RBP31.19■■■□□ 2.58
CCM2-201ENST00000258781 KCNF1Q9H3M0 494 aa31.19■■■□□ 2.58
CCM2-201ENST00000258781 GINM1Q9NU53 330 aa31.19■■■□□ 2.58
CCM2-201ENST00000258781 RMND1Q9NWS8 449 aa31.19■■■□□ 2.58
CCM2-201ENST00000258781 USP2O75604 605 aaPredicted RBP31.18■■■□□ 2.58
CCM2-201ENST00000258781 TECP42680 631 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 STAMQ92783 540 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 CDCA5Q96FF9 252 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 RAB34Q9BZG1 259 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 IFNKQ9P0W0 207 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 USP17L15C9J2P7 530 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 USP17L13C9JLJ4 530 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 USP17L11C9JVI0 530 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 USP17L18D6R9N7 530 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 USP17L22D6RA61 530 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 USP17L17D6RBQ6 530 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 USP17L19D6RCP7 530 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 USP17L20D6RJB6 530 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 USP11P51784 963 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 FANCCQ00597 558 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 USP17L24Q0WX57 530 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 CUL4BQ13620 913 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 FAM83BQ5T0W9 1011 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 USP17L6PQ6QN14 398 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.18■■■□□ 2.58
CCM2-201ENST00000258781 CHURC1Q8WUH1 139 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 ANO3Q9BYT9 981 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 DDX25Q9UHL0 483 aaKnown RBP31.18■■■□□ 2.58
CCM2-201ENST00000258781 NRBP1Q9UHY1 535 aa31.18■■■□□ 2.58
CCM2-201ENST00000258781 MEIS2O14770 477 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms