RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 WDR66Q8TBY9 1149 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 BCAS4Q8TDM0 211 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 SH3RF3Q8TEJ3 882 aaPredicted RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 NSUN4Q96CB9 384 aaKnown RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 NYXQ9GZU5 481 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 BSDC1Q9NW68 430 aaPredicted RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 RTCBQ9Y3I0 505 aaKnown RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 TOPAZ1Q8N9V7 1692 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 POTEMA6NI47 508 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 NCK2O43639 380 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 FTCDO95954 541 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 GGCXP38435 758 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 LIG3P49916 1009 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 MNAT1P51948 309 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 RCAN1P53805 252 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 GNGT1P63211 74 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 IFFO1Q0D2I5 559 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 SLC9C1Q4G0N8 1177 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 NT5DC1Q5TFE4 455 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 ANKRD40Q6AI12 368 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 TAX1BP1Q86VP1 789 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 ADSSL1Q8N142 457 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 DHTKD1Q96HY7 919 aaPredicted RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 CCDC43Q96MW1 224 aaKnown RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 RIOK1Q9BRS2 568 aaKnown RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 TRIM31Q9BZY9 425 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 LACRTQ9GZZ8 138 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 CCDC113Q9H0I3 377 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.26□□□□□ -1.57
USP44-201ENST00000258499 FAM205AQ6ZU69 1335 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 ESYT3A0FGR9 886 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 PLEKP08567 350 aaPredicted RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 PCP11498 1178 aaKnown RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 BTDP43251 543 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 KIF11P52732 1056 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 GUCY2DQ02846 1103 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 EHHADHQ08426 723 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 KLHL30Q0D2K2 578 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 ITPK1Q13572 414 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 NFRKBQ6P4R8 1299 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 C3orf67Q6ZVT6 689 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 TMC4Q7Z404 712 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 TMEM47Q9BQJ4 181 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 MTA3Q9BTC8 594 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 SELENOOQ9BVL4 669 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 LSM14BQ9BX40 385 aaKnown RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 NDST4Q9H3R1 872 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 THAP9Q9H5L6 903 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 TMEM260Q9NX78 707 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 L1RE1Q9UN81 338 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 SAMM50Q9Y512 469 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 LRRC37A3O60309 1634 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 SMIM23A6NLE4 172 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 LRRIQ3A6PVS8 624 aaPredicted RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 CEP104O60308 925 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 CAMTA2O94983 1202 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 SLC16A2P36021 539 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 USP8P40818 1118 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 ADCY7P51828 1080 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 USP14P54578 494 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 MFSD14BQ5SR56 506 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 VPS36Q86VN1 386 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 LARP4BQ92615 738 aaKnown RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 RPGRIP1Q96KN7 1286 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 C8orf37Q96NL8 207 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 HYOU1Q9Y4L1 999 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 CAPN15O75808 1086 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 NTSR2O95665 410 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 GTF2A1P52655 376 aaPredicted RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 UBE2SQ16763 222 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 KIAA0753Q2KHM9 967 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 CFAP221Q4G0U5 840 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 SFMBT2Q5VUG0 894 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 TBC1D9BQ66K14 1250 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 MYOCDQ8IZQ8 938 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 GJA10Q969M2 543 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 TRIM9Q9C026 710 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 EHD2Q9NZN4 543 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 PCDHA13Q9Y5I0 950 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 MST1RQ04912 1400 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 ITIH6Q6UXX5 1313 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 LRRC53A6NM62 1247 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 CDR1P51861 262 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 GFPT1Q06210 699 aaPredicted RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 PLS1Q14651 629 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 ZFYVE27Q5T4F4 411 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 PDXDC2PQ6P474 469 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 TXNRD3Q86VQ6 643 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 DGKHQ86XP1 1220 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 CERS3Q8IU89 383 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 CLEC10AQ8IUN9 316 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 ELOA2Q8IYF1 753 aaPredicted RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 OTUD6BQ8N6M0 293 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 GPATCH11Q8N954 259 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 CNBD1Q8NA66 436 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 KRT12Q99456 494 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 CAPS2Q9BXY5 557 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 MKRN1Q9UHC7 482 aaKnown RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 ADAMTS1Q9UHI8 967 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 TCEAL9Q9UHQ7 104 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms