RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 UQCC2Q9BRT2 126 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 SAP30BPQ9UHR5 308 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 N6AMT1Q9Y5N5 214 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 TMEM110-MUSTN1A8MSY1 372 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 XPOTO43592 962 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 ACTN4O43707 911 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 SUN1O94901 812 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 LDHBP07195 334 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 KRT6CP48668 564 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 RBM6P78332 1123 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 TFAP4Q01664 338 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 KIF23Q02241 960 aaPredicted RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 COBLL1Q53SF7 1204 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 ZNF449Q6P9G9 518 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 ELOA2Q8IYF1 753 aaPredicted RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 TMX3Q96JJ7 454 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 CCDC77Q9BR77 488 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 RAD21L1Q9H4I0 556 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 UBN1Q9NPG3 1134 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 TXLNGQ9NUQ3 528 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 EXOC5O00471 708 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 MBD4O95243 580 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 RAD23BP54727 409 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 WASHC5Q12768 1159 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 ELMSAN1Q6PJG2 1045 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 PATL1Q86TB9 770 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 PIP4K2CQ8TBX8 421 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 CARD14Q9BXL6 1004 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 NACAP1Q9BZK3 213 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 EVLQ9UI08 416 aaPredicted RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 CAPN11Q9UMQ6 739 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 CNPY2Q9Y2B0 182 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 C15orf41Q9Y2V0 281 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 SLC4A7Q9Y6M7 1214 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 IGHMBP2P38935 993 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 RASGRF1Q13972 1273 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 KIF22Q14807 665 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 AOPEPQ8N6M6 819 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 YIPF2Q9BWQ6 316 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 CBX8Q9HC52 389 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 C8orf4Q9NR00 106 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 PCDHGA4Q9Y5G9 962 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 FLT4P35916 1363 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 AXIN1O15169 862 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 DNAJC6O75061 913 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 RAB11FIP3O75154 756 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 RPS6KA5O75582 802 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 MXI1P50539 228 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 HABP4Q5JVS0 413 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 PI16Q6UXB8 463 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 RSRC2Q7L4I2 434 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 MCM10Q7L590 875 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 SCAIQ8N9R8 606 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 RBM17Q96I25 401 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 PPP1R13BQ96KQ4 1090 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 NDNQ99608 321 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 ABCB6Q9NP58 842 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 POLE3Q9NRF9 147 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 TTF2Q9UNY4 1162 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 MAGEA13PA6NCF6 341 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 EIF3HO15372 352 aaKnown RBP eCLIP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 KRT2P35908 639 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 SFMBT2Q5VUG0 894 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 SAMD14Q8IZD0 417 aaPredicted RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 IGSF22Q8N9C0 903 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 GPT2Q8TD30 523 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 DHX58Q96C10 678 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 ZNF446Q9NWS9 450 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 STMN3Q9NZ72 180 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 UGGT1Q9NYU2 1555 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 PLA2R1Q13018 1463 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 CLTCL1P53675 1640 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 CSE1LP55060 971 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 ITIH3Q06033 890 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 MTMR3Q13615 1198 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 CCDC62Q6P9F0 684 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 FCHSD1Q86WN1 690 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 TRIML2Q8N7C3 387 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 CCDC42Q96M95 316 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 DDX28Q9NUL7 540 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 IL1RAPL1Q9NZN1 696 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 SPHKAPQ2M3C7 1700 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 INO80Q9ULG1 1556 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 GSTTP1A0A1W2PQM5 241 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 ATP5DP30049 168 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 MRPS9P82933 396 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 GOLGA8FQ08AF8 430 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 GOLGA8DPQ0D2H9 430 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 ANKRD1Q15327 319 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 KRT27Q7Z3Y8 459 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 CATIPQ7Z7H3 387 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 BARX2Q9UMQ3 279 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 TEX28O15482 410 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 FOXO3O43524 673 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 BCRP11274 1271 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 RCN2Q14257 317 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 FXNQ16595 210 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 CCDC122Q5T0U0 273 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 KCTD16Q68DU8 428 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 CAPZA3Q96KX2 299 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms