RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PCDHB15Q9Y5E8 787 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 YTHDC2Q9H6S0 1430 aaKnown RBP14.38□□□□□ -0.11
NEK9-201ENST00000238616 GPC4O75487 556 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 TUBB4AP04350 444 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 UBXN2AP68543 259 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 YWHAHQ04917 246 aaPredicted RBP14.38□□□□□ -0.11
NEK9-201ENST00000238616 NSUN2Q08J23 767 aaKnown RBP eCLIP14.38□□□□□ -0.11
NEK9-201ENST00000238616 FAM160B1Q5W0V3 765 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 DCAF15Q66K64 600 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 CEP85Q6P2H3 762 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 MRPL50Q8N5N7 158 aaKnown RBP14.38□□□□□ -0.11
NEK9-201ENST00000238616 IWS1Q96ST2 819 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 M0R2C6 588 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 CUTAO60888 179 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 TNNI3KQ59H18 835 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 SLFN12Q8IYM2 578 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 SNX19Q92543 992 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 NT5C3AQ9H0P0 336 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 FPGT-TNNI3KV9GXZ4 949 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 SOS1Q07889 1333 aaPredicted RBP14.38□□□□□ -0.11
NEK9-201ENST00000238616 SH3TC1Q8TE82 1336 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 NEMP1O14524 444 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 SART1O43290 800 aaKnown RBP14.38□□□□□ -0.11
NEK9-201ENST00000238616 ESRRBO95718 433 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 ARHGAP25P42331 645 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 CYP4A11Q02928 519 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 CERS3Q8IU89 383 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 LRRC8CQ8TDW0 803 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 PPP1R9AQ9ULJ8 1098 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 COBLO75128 1261 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 FAM186BQ8IYM0 893 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 FBXL13Q8NEE6 735 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 MYH7P12883 1935 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 RNMTO43148 476 aaKnown RBP14.38□□□□□ -0.11
NEK9-201ENST00000238616 LRRN2O75325 713 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.38□□□□□ -0.11
NEK9-201ENST00000238616 RNF139Q8WU17 664 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 TRPM2O94759 1503 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 NCOA1Q15788 1441 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 C17orf53Q8N3J3 647 aaPredicted RBP14.37□□□□□ -0.11
NEK9-201ENST00000238616 STAG1Q8WVM7 1258 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 POLR3CQ9BUI4 534 aaPredicted RBP14.37□□□□□ -0.11
NEK9-201ENST00000238616 CLRN2A0PK11 232 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 CPP00450 1065 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 THOC5Q13769 683 aaKnown RBP14.37□□□□□ -0.11
NEK9-201ENST00000238616 CACNA1FO60840 1977 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 TFAMQ00059 246 aaKnown RBP14.37□□□□□ -0.11
NEK9-201ENST00000238616 HDAC1Q13547 482 aaPredicted RBP14.37□□□□□ -0.11
NEK9-201ENST00000238616 CCDC85BQ15834 202 aaPredicted RBP14.37□□□□□ -0.11
NEK9-201ENST00000238616 KIF19Q2TAC6 998 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 DNAJC8O75937 253 aaPredicted RBP14.37□□□□□ -0.11
NEK9-201ENST00000238616 HLA-DPA1P20036 260 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 HNRNPDLO14979 420 aaKnown RBP14.37□□□□□ -0.11
NEK9-201ENST00000238616 ART3Q13508 389 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 GLE1Q53GS7 698 aaKnown RBP14.37□□□□□ -0.11
NEK9-201ENST00000238616 SCYL3Q8IZE3 742 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 DEPDC1BQ8WUY9 529 aa14.37□□□□□ -0.11
NEK9-201ENST00000238616 KCNJ18B7U540 433 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 A1BGP04217 495 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 GOLGA8HP0CJ92 632 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 KCNJ12Q14500 433 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 KCTD1Q719H9 257 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 CDC37L1Q7L3B6 337 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 DIS3L2Q8IYB7 885 aaKnown RBP14.36□□□□□ -0.11
NEK9-201ENST00000238616 GPKOWQ92917 476 aaPredicted RBP eCLIP14.36□□□□□ -0.11
NEK9-201ENST00000238616 YIPF2Q9BWQ6 316 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 OGFRQ9NZT2 677 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 TBK1Q9UHD2 729 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 GTPBP10A4D1E9 387 aaKnown RBP14.36□□□□□ -0.11
NEK9-201ENST00000238616 SETSIPP0DME0 302 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 NCF2P19878 526 aaPredicted RBP14.36□□□□□ -0.11
NEK9-201ENST00000238616 ZNF790Q6PG37 636 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 RETREG2Q8NC44 543 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 FAN1Q9Y2M0 1017 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 SAR1BQ9Y6B6 198 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 ANKRD36BQ8N2N9 1353 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 CHMLP26374 656 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 MESDQ14696 234 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.36□□□□□ -0.11
NEK9-201ENST00000238616 TRAIPQ9BWF2 469 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 NFE2L3Q9Y4A8 694 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 SRGAP2CP0DJJ0 459 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 MORC3Q14149 939 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 TMTC3Q6ZXV5 915 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 APPBP2Q92624 585 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 ABHD8Q96I13 439 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 PPP2R5EQ16537 467 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 SMC5Q8IY18 1101 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 NFKBIL1Q9UBC1 381 aaPredicted RBP14.36□□□□□ -0.11
NEK9-201ENST00000238616 TSKSQ9UJT2 592 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 CLCA2Q9UQC9 943 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 MRPL11Q9Y3B7 192 aaKnown RBP14.36□□□□□ -0.11
NEK9-201ENST00000238616 NLRP12P59046 1061 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 STX1BP61266 288 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 ATL3Q6DD88 541 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 TEKT3Q9BXF9 490 aa14.36□□□□□ -0.11
NEK9-201ENST00000238616 RPSAP08865 295 aaKnown RBP14.35□□□□□ -0.11
NEK9-201ENST00000238616 ELMOD1Q8N336 334 aa14.35□□□□□ -0.11
NEK9-201ENST00000238616 SLC39A2Q9NP94 309 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms