RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 LACTBP83111 547 aaPredicted RBP12.14□□□□□ -0.47
CDCA3-201ENST00000229265 SPP2Q13103 211 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 MTFR1Q15390 333 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 ANO6Q4KMQ2 910 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 GADL1Q6ZQY3 521 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 CKAP2LQ8IYA6 745 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 CEP57L1Q8IYX8 460 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 RNF214Q8ND24 703 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 FTOQ9C0B1 505 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDCA3-201ENST00000229265 KANSL2Q9H9L4 492 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 TXNRD2Q9NNW7 524 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 VPS54Q9P1Q0 977 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 BECN2A8MW95 431 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 CTNND1O60716 968 aaKnown RBP12.13□□□□□ -0.47
CDCA3-201ENST00000229265 PPFIA3O75145 1194 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 ADCY5O95622 1261 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 ALDH1A1P00352 501 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 MARCKSP29966 332 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-201ENST00000229265 HOXA7P31268 230 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-201ENST00000229265 SHMT1P34896 483 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 LONP1P36776 959 aaKnown RBP12.13□□□□□ -0.47
CDCA3-201ENST00000229265 PRPHP41219 470 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 HMGCS2P54868 508 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 ATP2C1P98194 919 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-201ENST00000229265 IQCB1Q15051 598 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 NPY5RQ15761 445 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 PPP1R18Q6NYC8 613 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 KRBA2Q6ZNG9 492 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 SIAH1Q8IUQ4 282 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 ACER1Q8TDN7 264 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 SHISA4Q96DD7 197 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 NAP1L4Q99733 375 aaKnown RBP12.13□□□□□ -0.47
CDCA3-201ENST00000229265 EFCC1Q9HA90 598 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 CBX8Q9HC52 389 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 DACH1Q9UI36 760 aa12.13□□□□□ -0.47
CDCA3-201ENST00000229265 HERC5Q9UII4 1024 aaKnown RBP12.13□□□□□ -0.47
CDCA3-201ENST00000229265 PARP14Q460N5 1801 aa12.12□□□□□ -0.47
CDCA3-201ENST00000229265 ZNF500O60304 480 aaPredicted RBP12.12□□□□□ -0.47
CDCA3-201ENST00000229265 MYL1P05976 194 aa12.12□□□□□ -0.47
CDCA3-201ENST00000229265 OSBPP22059 807 aa12.12□□□□□ -0.47
CDCA3-201ENST00000229265 MSNP26038 577 aaKnown RBP12.12□□□□□ -0.47
CDCA3-201ENST00000229265 MDM2Q00987 491 aaPredicted RBP12.12□□□□□ -0.47
CDCA3-201ENST00000229265 NR5A1Q13285 461 aa12.12□□□□□ -0.47
CDCA3-201ENST00000229265 TTC38Q5R3I4 469 aa12.12□□□□□ -0.47
CDCA3-201ENST00000229265 KRT25Q7Z3Z0 450 aa12.12□□□□□ -0.47
CDCA3-201ENST00000229265 CMTR1Q8N1G2 835 aaKnown RBP12.12□□□□□ -0.47
CDCA3-201ENST00000229265 CNNM3Q8NE01 707 aa12.12□□□□□ -0.47
CDCA3-201ENST00000229265 CEP95Q96GE4 821 aa12.12□□□□□ -0.47
CDCA3-201ENST00000229265 ZFYVE28Q9HCC9 887 aa12.12□□□□□ -0.47
CDCA3-201ENST00000229265 SEC63Q9UGP8 760 aaKnown RBP12.12□□□□□ -0.47
CDCA3-201ENST00000229265 PCDHB6Q9Y5E3 794 aa12.12□□□□□ -0.47
CDCA3-201ENST00000229265 PDE4DIPQ5VU43 2346 aa12.12□□□□□ -0.47
CDCA3-201ENST00000229265 PNMA6FA0A0J9YX94 578 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 A0A1W2PRG0 241 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 CXCL11O14625 94 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 NEMFO60524 1076 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 SMC2O95347 1197 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 SLFN14P0C7P3 912 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 PDHBP11177 359 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 SARSP49591 514 aaKnown RBP12.11□□□□□ -0.47
CDCA3-201ENST00000229265 PRKCZQ05513 592 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 TRIM32Q13049 653 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 MTMR2Q13614 643 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 STAG2Q8N3U4 1231 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 MLKLQ8NB16 471 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 SPATA20Q8TB22 786 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 DCAF4Q8WV16 495 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 ARMC5Q96C12 935 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 MRFAP1L1Q96HT8 127 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 ZNF333Q96JL9 665 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 AK8Q96MA6 479 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 ZBTB21Q9ULJ3 1066 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 ZKSCAN5Q9Y2L8 839 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 ALPK3Q96L96 1907 aa12.11□□□□□ -0.47
CDCA3-201ENST00000229265 GREB1LQ9C091 1923 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-201ENST00000229265 CCDC194A0A1B0GVG4 234 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 SLC26A4O43511 780 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 CYTH3O43739 400 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 CNMDO75829 334 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 GH2P01242 217 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 PSMC4P43686 418 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 MLLT1Q03111 559 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-201ENST00000229265 Q3C1V9 767 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 CERKLQ49MI3 558 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-201ENST00000229265 TMEM179Q6ZVK1 233 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 IQUBQ8NA54 791 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 MTMR8Q96EF0 704 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 ERO1AQ96HE7 468 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 GSDMAQ96QA5 445 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 GINM1Q9NU53 330 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 CLIP2Q9UDT6 1046 aa12.1□□□□□ -0.47
CDCA3-201ENST00000229265 STXBP3O00186 592 aa12.09□□□□□ -0.47
CDCA3-201ENST00000229265 ELNP15502 786 aa12.09□□□□□ -0.47
CDCA3-201ENST00000229265 MRPL12P52815 198 aaKnown RBP12.09□□□□□ -0.47
CDCA3-201ENST00000229265 ZNF543Q08ER8 600 aa12.09□□□□□ -0.47
CDCA3-201ENST00000229265 PTGDRQ13258 359 aa12.09□□□□□ -0.47
CDCA3-201ENST00000229265 LONRF3Q496Y0 759 aa12.09□□□□□ -0.47
CDCA3-201ENST00000229265 SH3RF1Q7Z6J0 888 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms