RNA–Protein interactions for RNA: ENST00000039989.8

TTC17-201, Transcript of tetratricopeptide repeat domain 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC17, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-201ENST00000039989 CCDC65Q8IXS2 484 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 ZNF280CQ8ND82 737 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 KCNB2Q92953 911 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 FANCLQ9NW38 375 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 C5P01031 1676 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 PEX10O60683 326 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 FAM47CQ5HY64 1035 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 FAM102BQ5T8I3 360 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 VCPKMTQ9H867 229 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.14□□□□□ -0.47
TTC17-201ENST00000039989 ZNF541Q9H0D2 1346 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 IQCA1LA6NCM1 817 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 NFKBIEO00221 500 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 EARS2Q5JPH6 523 aaKnown RBP12.14□□□□□ -0.47
TTC17-201ENST00000039989 KIAA1328Q86T90 577 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 HPS3Q969F9 1004 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 PSMD1Q99460 953 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 FAM217BQ9NTX9 383 aaPredicted RBP12.14□□□□□ -0.47
TTC17-201ENST00000039989 PCDHB13Q9Y5F0 798 aa12.14□□□□□ -0.47
TTC17-201ENST00000039989 GRIN3BO60391 1043 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 HUNKP57058 714 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 GOLGA8FQ08AF8 430 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 GOLGA8DPQ0D2H9 430 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 NELFBQ8WX92 580 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 TMEM60Q9H2L4 133 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 WDR19Q8NEZ3 1342 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 VIL1P09327 827 aaKnown RBP12.13□□□□□ -0.47
TTC17-201ENST00000039989 MCF2L2Q86YR7 1114 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 CRACR2AQ9BSW2 395 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 SRRTQ9BXP5 876 aaKnown RBP12.13□□□□□ -0.47
TTC17-201ENST00000039989 CACNA1FO60840 1977 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 COL18A1P39060 1754 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 BAATQ14032 418 aaPredicted RBP12.13□□□□□ -0.47
TTC17-201ENST00000039989 SPDYE2Q495Y8 402 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 ARHGAP29Q52LW3 1261 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 HS2ST1Q7LGA3 356 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 ZSCAN30Q86W11 494 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 DHX37Q8IY37 1157 aaKnown RBP12.13□□□□□ -0.47
TTC17-201ENST00000039989 AZI2Q9H6S1 392 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 TRPC6Q9Y210 931 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 SALL1Q9NSC2 1324 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 SYNRGQ9UMZ2 1314 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 RGL2O15211 777 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 SSR1P43307 286 aaKnown RBP12.13□□□□□ -0.47
TTC17-201ENST00000039989 NTRK3Q16288 839 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 SHC4Q6S5L8 630 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 BANK1Q8NDB2 785 aa12.13□□□□□ -0.47
TTC17-201ENST00000039989 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 SKILP12757 684 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 NLRP12P59046 1061 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 ZNF445P59923 1031 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 HDLBPQ00341 1268 aaKnown RBP12.12□□□□□ -0.47
TTC17-201ENST00000039989 FAM160B2Q86V87 743 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 BHMT2Q9H2M3 363 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 POTECB2RU33 542 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 B4DLN1 442 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 E9PMD0 336 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 STXBP3O00186 592 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 CYTH3O43739 400 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 KIF20AO95235 890 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 CYP2J2P51589 502 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 FANCCQ00597 558 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 GALNT17Q6IS24 598 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 MNS1Q8NEH6 495 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 CAGE1Q8TC20 777 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 DRC1Q96MC2 740 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 SPAG5Q96R06 1193 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 RGL1Q9NZL6 768 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 NYAP2Q9P242 653 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 GDAQ9Y2T3 454 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 FOSP01100 380 aaPredicted RBP12.12□□□□□ -0.47
TTC17-201ENST00000039989 POTEIP0CG38 1075 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 LRRC27Q9C0I9 530 aa12.12□□□□□ -0.47
TTC17-201ENST00000039989 ALDH8A1Q9H2A2 487 aaPredicted RBP12.12□□□□□ -0.47
TTC17-201ENST00000039989 SRPRBQ9Y5M8 271 aaKnown RBP12.12□□□□□ -0.47
TTC17-201ENST00000039989 RPS12P25398 132 aaKnown RBP12.11□□□□□ -0.47
TTC17-201ENST00000039989 MAP3K9P80192 1104 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 PAK1Q13153 545 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 GNPTABQ3T906 1256 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 TEKT3Q9BXF9 490 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 ZSWIM4Q9H7M6 989 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 CUL4BQ13620 913 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 PHF20Q9BVI0 1012 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 XPO4Q9C0E2 1151 aaKnown RBP12.11□□□□□ -0.47
TTC17-201ENST00000039989 GPBP1L1Q9HC44 474 aaPredicted RBP12.11□□□□□ -0.47
TTC17-201ENST00000039989 KDM3BQ7LBC6 1761 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 PTPREP23469 700 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 ZNF157P51786 506 aaPredicted RBP12.11□□□□□ -0.47
TTC17-201ENST00000039989 RAPGEF1Q13905 1077 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 PDE4DIPQ5VU43 2346 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 ADARB2Q9NS39 739 aaKnown RBP12.11□□□□□ -0.47
TTC17-201ENST00000039989 PHACTR2O75167 634 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 PPP6R2O75170 966 aa12.11□□□□□ -0.47
TTC17-201ENST00000039989 RPN1P04843 607 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms