RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Anks1bQ8BIZ1 1259 aa10.08□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Hps6Q8BLY7 805 aa10.08□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ska2Q9CR46 120 aa10.08□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Thap2Q9D305 217 aa10.08□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Sept3Q9Z1S5 350 aa10.08□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Kidins220E9Q9B7 1793 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Nkx1-1G3UXB3 402 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Lrrc43Q3V0L5 667 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Kctd16Q5DTY9 427 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gm5169Q5M8P2 212 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Sik1Q60670 779 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cyp7b1Q60991 507 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Usp37Q8C0R0 979 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Znf467Q8JZL0 594 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cacnb1Q8R3Z5 597 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rsph3bQ9DA80 389 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 SyncQ9EPM5 470 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Anks1aP59672 1150 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 NxnP97346 435 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cct6bQ61390 531 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ddx39aQ8VDW0 427 aaKnown RBP10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Creb3l3Q91XE9 479 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Lzts2Q91YU6 671 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 MlxiplQ99MZ3 864 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gkap1Q9JMB0 366 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Speer2E9Q9U2 264 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Tuft1O08970 390 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Bsdc1Q80Y55 427 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Wbp11Q923D5 641 aaKnown RBP10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Saal1Q9D2C2 474 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Mcm5P49718 733 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gm136Q3V037 328 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Tsr1Q5SWD9 803 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 NntQ61941 1086 aaKnown RBP10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Aggf1Q7TN31 711 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Zbtb1Q91VL9 713 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Pagr1aQ99L02 253 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ehbp1l1Q99MS7 1716 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 4932429P05RikA2ADI4 785 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Wbp4Q61048 376 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ctnna3Q65CL1 895 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 MypnQ5DTJ9 1315 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 PtpruB1AUH1 1446 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gfpt1P47856 697 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Polr2fP61219 127 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Kiaa1468Q148V7 1216 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rhpn1Q61085 643 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Dpp8Q80YA7 892 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Sptlc3Q8BG54 563 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 CerkQ8K4Q7 531 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Tspyl4Q8VD63 406 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 AdarQ99MU3 1178 aaKnown RBP10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Glrx3Q9CQM9 337 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Capn15Q9JLG8 1095 aa10.07□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cpb1B2RS76 415 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Krt78E9Q0F0 1068 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Phldb3E9QAF4 648 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Tcp1P11983 556 aaKnown RBP10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rps8P62242 208 aaKnown RBP10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Dok7Q18PE0 504 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ppp1r37Q8BKR5 712 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Pym1Q8CHP5 203 aaKnown RBP10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Satb2Q8VI24 733 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Tor1aip1Q921T2 595 aaKnown RBP10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Fsip1Q9D3V5 435 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Mfap3lQ9D3X9 409 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ercc4Q9QZD4 917 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rgs12Q8CGE9 1381 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Tcof1O08784 1320 aaKnown RBP10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Lrrc74aA0A1Y7VMD6 494 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Nek1P51954 1203 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Skap2Q3UND0 358 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Bag2Q91YN9 210 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 TnrQ8BYI9 1358 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Zscan18E9PUD6 809 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gimd1E9PW74 217 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Atp6v1aP50516 617 aaKnown RBP10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 CltcQ68FD5 1675 aaKnown RBP10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 MaddQ80U28 1577 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Slc39a2G3X943 309 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Krt13P08730 437 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Nab2Q61127 525 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Kiaa1841Q68FF0 718 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cep57Q8CEE0 500 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Dbndd2Q9CRD4 158 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Pex11aQ9Z211 246 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rtl9Q32KG4 1339 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ahdc1Q6PAL7 1594 aaKnown RBP10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cdk5rap2Q8K389 1822 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cnbd1B1AWM0 430 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Nhej1Q3KNJ2 295 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Smim5Q8BT42 78 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Eno4Q8C042 619 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ndufb9Q9CQJ8 179 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gins2Q9D600 185 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ccdc152E9PX14 254 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Zfp408H7BX78 710 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Fdx1P46656 188 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Kifap3P70188 793 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 PcQ05920 1178 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms