RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Gm29609Q3UU56 907 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Znf423Q80TS5 1292 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Usp6nlQ80XC3 819 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Crb2Q80YA8 1282 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Gtf3c2Q8BL74 907 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Stac3Q8BZ71 360 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Kctd12bQ8C7J6 292 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Dppa3Q8QZY3 150 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 PtmsQ9D0J8 101 aaKnown RBP10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Adgrf4Q9D2L6 698 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Ttc9bQ9D6E4 239 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Acox2Q9QXD1 681 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Rp1l1Q8CGM2 1859 aa10.1□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Kmt2bO08550 2713 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Vps13aQ5H8C4 3166 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Gm4924A0A1B0GR71 966 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 A0A1Y7VJH8 109 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Fam186bD3Z420 943 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Ppp1r9aH3BJD6 1292 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Metap2O08663 478 aaKnown RBP10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 mt-Co3P00416 261 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Mdm2P23804 489 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Tshz1Q5DTH5 1084 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Samhd1Q60710 627 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Cln3Q61124 438 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Wdr44Q6NVE8 915 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 BcrQ6PAJ1 1270 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Fam160b2Q80YR2 744 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Fbxo28Q8BIG4 368 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Agbl2Q8CDK2 862 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Cyp27a1Q9DBG1 533 aa10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Twf2Q9Z0P5 349 aaKnown RBP10.09□□□□□ -0.79
Pdlim5-209ENSMUST00000196908 Myh3P13541 1940 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Slc6a21A0A1B0GSD2 748 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Klhl34A2AI76 644 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Dnajc25A2ALW5 357 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ythdc1E9Q5K9 736 aaKnown RBP10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Vmn2r68L7N2B3 851 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Casq1O09165 405 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Nhlh1Q02576 133 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 VrtnQ3SYK4 740 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 DhpsQ3TXU5 369 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Tmem199Q5SYH2 208 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Nme8Q715T0 586 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Pgrmc2Q80UU9 217 aaKnown RBP10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Caskin2Q8VHK1 1201 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Tdrd3Q91W18 743 aaKnown RBP10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 GldcQ91W43 1025 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Tm4sf5Q91XF2 196 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Pla2g12bQ99P27 195 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Sept12Q9D451 317 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Efcc1Q9JJF6 558 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Msgn1Q9JK54 188 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 PolkQ9QUG2 852 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Klrc1Q9Z202 244 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Kif26aQ52KG5 1881 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Col12a1Q60847 3120 aa10.08□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Baz2bA2AUY4 2123 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 ColqO35348 457 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Phox2bO35690 314 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Anapc15P60007 132 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Sfi1Q3UZY0 1216 aaKnown RBP10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ttc9Q3V038 219 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Fam228bQ497Q6 232 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Fscn1Q61553 493 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ccdc82Q6PG04 518 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 GmipQ6PGG2 971 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Dpp8Q80YA7 892 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ift74Q8BKE9 600 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Arid5bQ8BM75 1188 aaKnown RBP10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Clec1aQ8BWY2 269 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Agbl3Q8CDP0 1006 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Rnf186Q9D241 226 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Pramef12Q9D2F1 463 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 SerhlQ9EPB5 311 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Nkx2-4Q9EQM3 354 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Cxcl11Q9JHH5 100 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 DgkeQ9R1C6 564 aa10.07□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 TicrrQ8BQ33 1889 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Col2a1P28481 1487 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Tlk2O55047 718 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Phka1P18826 1241 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ms4a2P20490 235 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Acvr2bP27040 536 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Psmc6P62334 389 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 St3gal2Q11204 350 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Znf692Q3U381 531 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Crtc1Q68ED7 630 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Tcaf3Q6QR59 914 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Sh3tc2Q80VA5 1289 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Zbed4Q80WQ9 1168 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Hsdl1Q8BTX9 330 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Med19Q8C1S0 244 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 4931406P16RikQ8C5X1 1059 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Cstf2tQ8C7E9 632 aaKnown RBP10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Fez1Q8K0X8 392 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Pspc1Q8R326 523 aaKnown RBP10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Gadd45gip1Q9CR59 222 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Themis3Q9CU24 569 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Tmem52Q9D702 196 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 98.4 ms