RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Riok3Q9DBU3 519 aaKnown RBP16.16■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Sbf1Q6ZPE2 1867 aa16.16■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Wdr19Q3UGF1 1341 aa16.16■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Kmt2eQ3UG20 1868 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Gcnt4E9Q649 455 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Cplx2P84086 134 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Cln3Q61124 438 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Ddx4Q61496 702 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Cdc14aQ6GQT0 603 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Gigyf2Q6Y7W8 1291 aaKnown RBP16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Myt1Q8CFC2 1127 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 PdgfcQ8CI19 345 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Bhmt2Q91WS4 363 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Tbx20Q9ES03 445 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Sel1lQ9Z2G6 790 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Sall1Q9ER74 1322 aa16.15■□□□□ 0.18
Ccdc171-204ENSMUST00000126429 Gm44511A0A0N4SW10 223 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Dnai2A2AC93 623 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Rgs9O54828 675 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Smarce1O54941 411 aaKnown RBP16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Prom1O54990 867 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Lnx1O70263 728 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Klrb1bP27812 223 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Muc1Q02496 630 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Gcnt1Q09324 428 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Cdkl5Q3UTQ8 938 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Smarcc2Q6PDG5 1213 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Dnaaf2Q8BPI1 814 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Yars2Q8BYL4 472 aaKnown RBP16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Acat1Q8QZT1 424 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Tesk2Q8VCT9 570 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Ndufb9Q9CQJ8 179 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Map3k20Q9ESL4 802 aaKnown RBP16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Hic1Q9R1Y5 733 aa16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 PfkpQ9WUA3 784 aaKnown RBP16.14■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Fyb2A2A995 729 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Oip5A2AQ14 241 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Irs1P35569 1233 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 SqleP52019 572 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Eif3j2Q66JS6 263 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Mcph1Q7TT79 822 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Dlg1Q811D0 905 aaKnown RBP16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 U2af1l4Q8BGJ9 220 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Ptcd2Q8R3K3 381 aaKnown RBP16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Pidd1Q9ERV7 915 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Twf2Q9Z0P5 349 aaKnown RBP16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Cntnap2Q9CPW0 1332 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Kntc1Q8C3Y4 2207 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Gucy1a2F8VQK3 730 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Eef2kO08796 724 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Btg4O70552 250 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Csf2raQ00941 388 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Ube2q1Q7TSS2 422 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Tnpo1Q8BFY9 898 aaKnown RBP16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Cdkn2aipQ8BI72 563 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Tdp1Q8BJ37 609 aa16.13■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Nme9A0A1L1SUL6 329 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Zc3h7bF8VPP8 982 aaKnown RBP16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Cyp3a25O09158 503 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 CebpaP53566 359 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Limch1Q3UH68 1057 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Slc27a1Q60714 646 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Crhr2Q60748 411 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Tbc1d10bQ8BHL3 798 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Kcnj14Q8JZN3 434 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Anapc4Q91W96 807 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Trim59Q922Y2 403 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Etnk1Q9D4V0 363 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Tfcp2Q9ERA0 502 aa16.12■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Nfx1B1AY10 1114 aaKnown RBP16.11■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 AunipE9Q6Z5 340 aa16.11■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Tmem132bF7BAB2 1078 aa16.11■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Ccdc85aQ5SP85 500 aa16.11■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Prmt6Q6NZB1 378 aa16.11■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Moxd2Q7TT41 619 aa16.11■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Kdm4aQ8BW72 1064 aa16.11■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Zcchc18Q8VD24 393 aa16.11■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Cul5Q9D5V5 780 aa16.11■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Fkbp1bQ9Z2I2 108 aa16.11■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 RptorQ8K4Q0 1335 aa16.11■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 AW822073A0A0N4SUK1 652 aa16.1■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Aco1P28271 889 aaKnown RBP16.1■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Fam89aQ14BJ1 175 aa16.1■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Nlrx1Q3TL44 975 aa16.1■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Ece1Q4PZA2 769 aa16.1■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 PhkbQ7TSH2 1085 aa16.1■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Smoc2Q8CD91 447 aa16.1■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Pqbp1Q91VJ5 263 aaKnown RBP16.1■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 SktA2AQ25 1946 aaKnown RBP16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Zfp853A0A1D5RM95 733 aa16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Stra6O70491 670 aa16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Slc6a20bO88575 635 aa16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 FosbP13346 338 aa16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Nap1l2P51860 460 aa16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 NfrkbQ6PIJ4 1296 aaKnown RBP16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Spata7Q80VP2 582 aa16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Pramel7Q810Y8 479 aa16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Me3Q8BMF3 604 aa16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Terf2ipQ91VL8 393 aa16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 F11Q91Y47 624 aa16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms