RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Kif17Q99PW8 1038 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Trmt112Q9DCG9 125 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Nap1l5Q9JJF0 156 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rps6ka4Q9Z2B9 773 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rsrc2A2RTL5 376 aaKnown RBP10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Gm4307E9PZY4 289 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Zfp213E9QAW0 468 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Gm4312K9J7E2 289 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Lrrc4bP0C192 709 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 HelqQ2VPA6 1069 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rc3h1Q4VGL6 1130 aaKnown RBP10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tsr1Q5SWD9 803 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Haus6Q6NV99 933 aaKnown RBP10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Trim6Q8BGE7 488 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Klhl20Q8VCK5 604 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Gps2Q921N8 327 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Six6os1Q9CTN5 574 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Acsl3Q9CZW4 720 aaKnown RBP10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tmem47Q9JJG6 181 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Kifap3P70188 793 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Trip13Q3UA06 432 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 NntQ61941 1086 aaKnown RBP10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 F13a1Q8BH61 732 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 HhatQ8BMT9 499 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Csgalnact2Q8C1F4 542 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Fermt3Q8K1B8 665 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Enox2Q8R0Z2 598 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ces1Q8VCC2 565 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Cd2apQ9JLQ0 637 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Gm36210A0A1B0GS00 229 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Zfp408H7BX78 710 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Capn2O08529 700 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Map3k12Q60700 888 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ccna1Q61456 421 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tsga10Q6NY15 697 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Naa35Q6PHQ8 725 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 GopcQ8BH60 463 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rcor2Q8C796 523 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Znf287Q9EQB9 759 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Mroh9G5E8L9 891 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ftl1P29391 183 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Eef2P58252 858 aaKnown RBP10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rhbdl3P58873 404 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Znf827Q505G8 1078 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ddx3yQ62095 658 aaKnown RBP10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Pcdhb5Q91XZ5 792 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Sf3b3Q921M3 1217 aaKnown RBP10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Mtfr1lQ9CWE0 289 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Mipol1Q9D9F8 279 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rwdd2aQ9D9S3 292 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ndst4Q9EQW8 872 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 VimP20152 466 aaKnown RBP10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Man1a2P39098 641 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Myo19Q5SV80 963 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rhpn1Q61085 643 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Fam196bQ6GQV1 535 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Nek5Q7TSC3 627 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Sdccag8Q80UF4 717 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Hirip3Q8BLH7 601 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Bpifb6Q8BU51 449 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Sox30Q8CGW4 782 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Dact1Q8R4A3 778 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Arfgap2Q99K28 520 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ribc1Q9D0B8 379 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Lrp2bpQ9D4C6 346 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Git2Q9JLQ2 708 aa10.76□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Myh1Q5SX40 1942 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Map3k15A2AQW0 1331 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Slc9a2Q3ZAS0 814 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 MaeaQ4VC33 396 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Krt74Q6IFZ9 495 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Prdm4Q80V63 803 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Dpp8Q80YA7 892 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Leng8Q8CBY3 785 aaKnown RBP10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Spata2Q8K004 515 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ifih1Q8R5F7 1025 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Eps8l1Q8R5F8 716 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 MlphQ91V27 590 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ppp2r5dQ91V89 594 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 EpgnQ924X1 152 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Sh3bp5lQ99LH9 392 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Mkrn1Q9QXP6 481 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Gm7168A0AUV4 508 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Cpsf2O35218 782 aaKnown RBP10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Atp6v1aP50516 617 aaKnown RBP10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Znf697Q569E7 569 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Camsap3Q80VC9 1252 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tmem179Q8BHH9 233 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Akt1s1Q9D1F4 257 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tube1Q9D6T1 475 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Cntnap1O54991 1385 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Nav1Q8CH77 1875 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Zfp174B9EJW5 407 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Zscan18E9PUD6 809 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 A430078G23RikE9Q7Y4 484 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 IkbkbO88351 757 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 LdhaP06151 332 aaKnown RBP10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Scg2Q03517 617 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rnf207Q3V3A7 635 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Large2Q5XPT3 690 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms