RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Ly6iQ9WU67 134 aa10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Sept2P42208 361 aaKnown RBP10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Znf280dQ68FE8 974 aa10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Haus6Q6NV99 933 aaKnown RBP10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Znf18Q810A1 556 aa10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Q8C6G1 249 aa10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Tcp11l2Q8K1H7 517 aa10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Ddx41Q91VN6 622 aaKnown RBP10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 BccipQ9CWI3 316 aa10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Arhgef25Q9CWR0 618 aa10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Borcs6Q9D6W8 360 aa10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Ubiad1Q9DC60 336 aa10.24□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Apol7aB2RT54 418 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Qrich1Q3UA37 777 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Msl1Q6PDM1 616 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Sdccag8Q80UF4 717 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Oxnad1Q8VE38 311 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Uap1Q91YN5 522 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Zranb2Q9R020 330 aaKnown RBP10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Cnbd1B1AWM0 430 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Usp17ldG5E8G2 545 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Usp17lcG5E8I7 545 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 PigsQ6PD26 555 aaKnown RBP10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Prpf40bQ80W14 870 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 NkrfQ8BY02 690 aaKnown RBP10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 MtrrQ8C1A3 696 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Kbtbd4Q8R179 534 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Atxn7Q8R4I1 867 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 AdpgkQ8VDL4 496 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Psmd2Q8VDM4 908 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Gnl2Q99LH1 728 aaKnown RBP10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Slc5a5Q99PN0 618 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Apopt1Q9CQW7 192 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Cul5Q9D5V5 780 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Serpinb12Q9D7P9 423 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Sertad1Q9JL10 236 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 AdnpQ9Z103 1108 aaKnown RBP10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Gm5580A0A0N4SVP8 411 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Rexo5D3YW29 759 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Kifc2O08672 792 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Orc4O88708 433 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Prl2c3P04768 224 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 CnpP16330 420 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Dnm2P39054 870 aaKnown RBP10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Nap1l4Q78ZA7 375 aaKnown RBP10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Arhgef6Q8K4I3 771 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Bhmt2Q91WS4 363 aa10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Uso1Q9Z1Z0 959 aaKnown RBP10.23□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Lrrc32G3XA59 663 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Hoxc13P50207 328 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Ano9P86044 747 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Acot10Q32MW3 439 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Jakmip3Q5DTN8 844 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Ankrd40Q5SUE8 363 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Dnph1Q80VJ3 173 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Tmem39aQ9CYC3 486 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Mis18aQ9CZJ6 204 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Fam205a1D3YZF6 1314 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Barx2O08686 283 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Epb41l4aP52963 686 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Setd4P58467 439 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Eif5P59325 429 aaKnown RBP10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 MyripQ8K3I4 856 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 CenpqQ9CPQ5 267 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 CutaQ9CQ89 177 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Pkd2l2Q9JLG4 621 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Homer1Q9Z2Y3 366 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Scn10aQ6QIY3 1958 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Gm5934D3Z4U6 212 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 MsnP26041 577 aaKnown RBP10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Tmtc1Q3UV71 942 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Lrrfip1Q3UZ39 729 aaKnown RBP10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Apbb1ipQ8R5A3 670 aa10.22□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Gm4907B1AXB9 411 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Rad23aP54726 363 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 PtgdrP70263 357 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Gtpbp6Q3U6U5 514 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Kctd1Q5M956 257 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Map3k12Q60700 888 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Madcam1Q61826 405 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Ms4a5Q810P8 197 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Cep95Q8BVV7 827 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Riox2Q8CD15 465 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Fam205aA2APU8 1308 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Nme9A0A1L1SUL6 329 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Lig1P37913 916 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Man1a2P39098 641 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Vmn1r209Q5NC97 312 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Mettl25Q6NXH8 597 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Pdzph1Q8BGR1 1238 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 PaoxQ8C0L6 504 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Dennd2aQ8C4S8 1000 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Ppfibp1Q8C8U0 969 aaKnown RBP10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Calhm4Q8CE93 315 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 SelenooQ9DBC0 667 aa10.21□□□□□ -0.77
Ctnna1-201ENSMUST00000042345 Mcm6P97311 821 aa10.21□□□□□ -0.78
Ctnna1-201ENSMUST00000042345 Kdm1aQ6ZQ88 853 aa10.21□□□□□ -0.78
Ctnna1-201ENSMUST00000042345 Necab1Q8BG18 352 aa10.21□□□□□ -0.78
Ctnna1-201ENSMUST00000042345 Eif6O55135 245 aa10.2□□□□□ -0.78
Ctnna1-201ENSMUST00000042345 Tp53P02340 387 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms