RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Psip1Q99JF8 528 aaKnown RBP17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 MrgbpQ9DAT2 204 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Ddx31Q6NZQ2 687 aaKnown RBP17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Krt5Q922U2 580 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Myh7Q91Z83 1935 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Ipo11Q8K2V6 975 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Prpsap2Q8R574 369 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Gm20425E9Q035 978 aaKnown RBP17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 SrprbP47758 269 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Rab3ipQ68EF0 428 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Slc44a1Q6X893 653 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Gpr108Q91WD0 569 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Syngap1F6SEU4 1340 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Atg4a-psA0A0G2JFS9 396 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Tex13cD3YU32 604 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 PpargP37238 505 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 LmnaP48678 665 aaKnown RBP17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Ulk3Q3U3Q1 472 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Itih3Q61704 889 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Myl10Q62082 202 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Atg4aQ8C9S8 396 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Spc24Q9D083 201 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Dpp7Q9ET22 506 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Ncoa3O09000 1398 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Cnksr1A2A9K7 700 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Pcdha4O88689 947 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Prmt9Q3U3W5 846 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Ushbp1Q8R370 680 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Bzw1Q9CQC6 419 aaKnown RBP17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Ccdc182Q9D9C6 152 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Hoxc9P09633 260 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Tfdp1Q08639 410 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Pnma5Q5DTT8 618 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 L3mbtl3Q8BLB7 883 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Copb1Q9JIF7 953 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Fam217aQ9D9W6 419 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 PapolbQ9WVP6 641 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 NpatQ8BMA5 1420 aa17.97■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 JrklB2RRL2 523 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Wdr36Q3TAQ9 899 aaKnown RBP17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Bend3Q6PAL0 825 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Slc4a7Q8BTY2 1034 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Usp19Q3UJD6 1360 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Aggf1Q7TN31 711 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Enox1Q8BHR2 643 aaKnown RBP17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Grtp1Q9D3N8 359 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Gm15262A0A140LIQ5 728 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Fermt3Q8K1B8 665 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Eif3cQ8R1B4 911 aaKnown RBP17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Uggt1Q6P5E4 1551 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Usp8Q80U87 1080 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Taf1bP97358 586 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 ThrspQ62264 150 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 GsdmeQ9Z2D3 512 aa17.96■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Gm16486A0A1D5RMD1 1434 aa17.96■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Mapkapk5O54992 473 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Q3TTJ4 293 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Atad2Q8CDM1 1040 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Pde9aO70628 534 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Mphosph8Q3TYA6 858 aaKnown RBP17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Plekhg1F6S200 1446 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 3425401B19RikD3Z1D3 1412 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Myh6Q02566 1938 aaKnown RBP17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Cyp2j7A0A140T8U1 504 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Per2O54943 1257 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Trim80Q3V061 624 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Rnf207Q3V3A7 635 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 TrhQ62361 256 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Arhgap18Q8K0Q5 663 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Appl2Q8K3G9 662 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Erp44Q9D1Q6 406 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Pdzd8B9EJ80 1147 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Kcnj14Q8JZN3 434 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Grin1P35438 938 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Trip13Q3UA06 432 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 LrgukQ9D5S7 820 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ighmbp2P40694 993 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Zbtb8osQ505B7 168 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Sorbs3Q9R1Z8 733 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Mgea5Q9EQQ9 916 aa17.95■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Atp1a3Q6PIC6 1013 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Arhgef11Q68FM7 1552 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Cdcp1Q5U462 833 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Fhod3Q76LL6 1578 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Cyp26a1O55127 497 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Gdap1O88741 358 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ppp1r12bQ8BG95 976 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 QarsQ8BML9 775 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Them5Q9CQJ0 248 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Klhl29Q80T74 875 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ehd2Q8BH64 543 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Psmd2Q8VDM4 908 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Rrp15Q9CYX7 281 aaKnown RBP17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 3830403N18RikQ9D6C3 208 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ppp1r2Q9DCL8 206 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Krt1P04104 637 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Kcnk13Q8R1P5 405 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Paip2bQ91W45 136 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Fgfr1op2Q9CRA9 253 aa17.94■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 EhhadhQ9DBM2 718 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms