RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Phldb2Q8K1N2 1249 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Cacnb1Q8R3Z5 597 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Rrp1bQ91YK2 724 aaKnown RBP11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 1700003F12RikA2AKE5 210 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Exoc3l2D3YUP5 789 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Rexo5D3YW29 759 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Man1a2P39098 641 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Vsnl1P62761 191 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Rbm12b2Q66JV4 834 aaKnown RBP11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ccdc93Q7TQK5 629 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Arhgef19Q8BWA8 802 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 MtrrQ8C1A3 696 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Sash3Q8K352 380 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Amhr2Q8K592 568 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 NapgQ9CWZ7 312 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 MymkQ9D1N4 221 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tubb4aQ9D6F9 444 aa11.88□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Zfyve9A2A8R0 1397 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Gm42641I6L9G2 585 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 DnttP09838 530 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Mboat4P0C7A3 435 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 RaraP11416 462 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Sap30bpQ02614 308 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Skap2Q3UND0 358 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ccna1Q61456 421 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Kdm1aQ6ZQ88 853 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 AtripQ8BMG1 785 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Onecut3Q8K557 490 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Dydc2Q9D3X8 139 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Plcb1Q9Z1B3 1216 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Nr1i2O54915 431 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Gfpt1P47856 697 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tmem165P52875 323 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tcp11Q01755 566 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Nsrp1Q5NCR9 542 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tbc1d23Q8K0F1 684 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Dnajc17Q91WT4 303 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Dbndd2Q9CRD4 158 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Trmt112Q9DCG9 125 aa11.87□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Lmbrd1Q8K0B2 537 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tmem134Q8R0J4 195 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tut1Q8R3F9 869 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Pla2g12bQ99P27 195 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Mrpl12Q9DB15 201 aaKnown RBP11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Psmd10Q9Z2X2 231 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Plekhg2Q6KAU7 1340 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Prl2c2P04095 224 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Stim1P70302 685 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Trappc10Q3TLI0 1259 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Eif3j1Q3UGC7 261 aaKnown RBP11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Kctd19Q562E2 927 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Rap1gap2Q5SVL6 712 aaKnown RBP11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tbc1d1Q60949 1255 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Eif3j2Q66JS6 263 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Def6Q8C2K1 630 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Eif3cQ8R1B4 911 aaKnown RBP11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 ParnQ8VDG3 624 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Q9D1Z2 194 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tube1Q9D6T1 475 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Gtf2iQ9ESZ8 998 aaKnown RBP11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Cbx8Q9QXV1 362 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Gdf11Q9Z1W4 405 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ecm29Q6PDI5 1840 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ccdc88cQ6VGS5 2009 aa11.86□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Scgb2b19J3QM75 112 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Grem2O88273 168 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Sec31aQ3UPL0 1230 aaKnown RBP11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Rbm26Q6NZN0 1012 aaKnown RBP11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Bicdl2Q8CHW5 507 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Sertad1Q9JL10 236 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Sh3tc1G3X9F6 1346 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Pnpla6Q3TRM4 1355 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Cnbd1B1AWM0 430 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tex13cD3YU32 604 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Cacnb3P54285 484 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Snap25P60879 206 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Map9Q3TRR0 646 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ccdc33Q3ULW6 985 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ttbk2Q3UVR3 1243 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Znf280dQ68FE8 974 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Spata4Q8K3V1 295 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 GlyctkQ8QZY2 523 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Lztfl1Q9JHQ5 299 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Spocd1B1ASB6 936 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Aknad1E9Q8N6 675 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Gm10378F6XQQ1 160 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Lrrc32G3XA59 663 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Aco1P28271 889 aaKnown RBP11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 KhsrpQ3U0V1 748 aaKnown RBP11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Slc2a13Q3UHK1 637 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Lrrc1Q80VQ1 524 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Cct8l1Q80YT3 562 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 LRWD1Q8BUI3 648 aaKnown RBP11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Kif2bQ8C0N1 668 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Dact1Q8R4A3 778 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ces1Q8VCC2 565 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Apopt1Q9CQW7 192 aa11.85□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Fam186bD3Z420 943 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 ByslO54825 436 aaKnown RBP11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Gucy1b3O54865 620 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms