RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Clca4aQ6Q473 924 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Sdccag8Q80UF4 717 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Dclk3Q8BWQ5 790 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 St5Q924W7 1134 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Tmem192Q9CXT7 266 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Fsip1Q9D3V5 435 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Gtf2iQ9ESZ8 998 aaKnown RBP16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Tacc2Q9JJG0 1149 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Chrna9G3X8Z7 479 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 UncxO08934 530 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Top1Q04750 767 aaKnown RBP16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Glg1Q61543 1175 aaKnown RBP16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Ccdc57Q6PHN1 1016 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Galnt17Q7TT15 598 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Dpp8Q80YA7 892 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 AdarQ99MU3 1178 aaKnown RBP16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Dnajc19Q9CQV7 116 aa16.77■□□□□ 0.28
Nkx3-1-201ENSMUST00000022646 Ifnar1P33896 590 aa16.77■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Tubb4bP68372 445 aaKnown RBP16.77■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Lrrc1Q80VQ1 524 aa16.77■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Q8C1R3 189 aa16.77■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Serpinb12Q9D7P9 423 aa16.77■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Rsbn1lD3Z0K6 821 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Nck2O55033 380 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Prl2c2P04095 224 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Atp6v0a2P15920 856 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Kcnj4P52189 445 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Hmgb1P63158 215 aaKnown RBP16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Terf1P70371 421 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Oxr1Q4KMM3 866 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 MmeQ61391 750 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ddx3yQ62095 658 aaKnown RBP16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Krt87Q6IMF0 495 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Slc9b1Q8C0X2 565 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Krt79Q8VED5 531 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Txnrd3Q99MD6 652 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Gtpbp4Q99ME9 634 aaKnown RBP16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Sar1bQ9CQC9 198 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Krt34Q9D646 392 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 March8Q9DBD2 286 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Sertad1Q9JL10 236 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Nlrp5Q9R1M5 1163 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Gm45208A0A140LJ36 292 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Gm1993A6X8I0 212 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 SlxD3Z347 212 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Kifc2O08672 792 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Eef2P58252 858 aaKnown RBP16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Carmil2Q3V3V9 1296 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Islr2Q5RKR3 745 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Irak1Q62406 710 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Igdcc3Q8BQC3 813 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ccdc73Q8CDM4 1066 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Mettl5Q8K1A0 209 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Glrx3Q9CQM9 337 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 EcsitQ9QZH6 435 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 TicrrQ8BQ33 1889 aa16.76■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Sec14l1A8Y5H7 715 aa16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 PurbO35295 324 aaKnown RBP16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Enc1O35709 589 aa16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ttll12Q3UDE2 639 aa16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Fxr2Q9WVR4 673 aaKnown RBP16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ccdc42Q5SV66 316 aa16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Gpt2Q8BGT5 522 aa16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Rab3il1Q8VDV3 383 aa16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Kremen1Q99N43 473 aa16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Armc3A2AU72 881 aa16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 ItgadQ3V0T4 1168 aa16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Krt222Q8CCX5 294 aa16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Eif3cQ8R1B4 911 aaKnown RBP16.75■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Gm7168A0AUV4 508 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Otud7bB2RUR8 840 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Abcb4P21440 1276 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Dok7Q18PE0 504 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ankrd13dQ6PD24 605 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 WhrnQ80VW5 918 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 D130040H23RikQ8BII3 405 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Lmbrd1Q8K0B2 537 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Lrrc41Q8K1C9 807 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Pcdhb5Q91XZ5 792 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Xrcc4Q924T3 326 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ccdc105Q9D4K7 499 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 DonsonQ9QXP4 560 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ces1aE9PYP1 563 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ttbk2Q3UVR3 1243 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Morc2bQ8C5W4 1022 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 CpzQ8R4V4 654 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Inpp4aQ9EPW0 939 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ndst4Q9EQW8 872 aa16.74■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Zfp831A2ADM8 1628 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Nf2P46662 596 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Sap30bpQ02614 308 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Haus6Q6NV99 933 aaKnown RBP16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Papd7Q6PB75 542 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Maip1Q8BHE8 291 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Trmt2aQ8BNV1 574 aaKnown RBP16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 AacsQ9D2R0 672 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Cmtr1Q9DBC3 837 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Ccnt1Q9QWV9 724 aaKnown RBP16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Trp53inp1Q9QXE4 239 aa16.73■□□□□ 0.27
Nkx3-1-201ENSMUST00000022646 Cbx8Q9QXV1 362 aa16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms