RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Lrriq3Q14DL3 633 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Rbm15bQ6PHZ5 887 aaKnown RBP14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Iqcb1Q8BP00 598 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Ccdc38Q8CDN8 563 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Lmbrd1Q8K0B2 537 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Q922C1 641 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 AdnpQ9Z103 1108 aaKnown RBP14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Shank2Q80Z38 1476 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Zfand4D3Z3C6 739 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Rasal2E9PW37 1286 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Elf1Q60775 612 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 NfrkbQ6PIJ4 1296 aaKnown RBP14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 GypcQ78HU7 95 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Csgalnact2Q8C1F4 542 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Ushbp1Q8R370 680 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Dact1Q8R4A3 778 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Saal1Q9D2C2 474 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Pex11aQ9Z211 246 aa14.04□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Gli3Q61602 1583 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Nova2D3YVV7 556 aaKnown RBP14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Gm2030D3Z7C4 212 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Fam207aP58468 219 aaKnown RBP14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Trappc10Q3TLI0 1259 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Mapk6Q61532 720 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Carmil3Q3UFQ8 1375 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Ano9P86044 747 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Znf667Q2TL60 609 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Brinp3Q499E0 766 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Kif5bQ61768 963 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Exoc3Q6KAR6 755 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Rbm26Q6NZN0 1012 aaKnown RBP14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 SpopQ6ZWS8 374 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Q8C5C9 218 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 GzmnQ920S1 248 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Filip1Q9CS72 1211 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Irx5Q9JKQ4 484 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Peg12Q9WVA7 283 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Ccdc152E9PX14 254 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Lrrc4bP0C192 709 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Ctnna2Q61301 953 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Sdccag8Q80UF4 717 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Cul5Q9D5V5 780 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Ndst4Q9EQW8 872 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Tfap4Q9JIZ5 338 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 MefvQ9JJ26 767 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Cabp5Q9JLK3 173 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Sept3Q9Z1S5 350 aa14.03□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Krt19P19001 403 aa14.02□□□□□ -0.16
Clcn3-201ENSMUST00000004430 DSCC1Q14AI0 399 aa14.02□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Slc9a1Q61165 820 aa14.02□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Gja3Q64448 417 aa14.02□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Tlr11Q6R5P0 926 aa14.02□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Asnsd1Q8BFS9 627 aa14.02□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Tor4aQ8BH02 426 aa14.02□□□□□ -0.16
Clcn3-201ENSMUST00000004430 CgasQ8C6L5 507 aa14.02□□□□□ -0.16
Clcn3-201ENSMUST00000004430 ParnQ8VDG3 624 aa14.02□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Ddx60E9PZQ1 1711 aa14.02□□□□□ -0.16
Clcn3-201ENSMUST00000004430 MeiocA2AG06 965 aa14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Cyp2c23E9Q5K4 494 aa14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Zfp42P22227 288 aa14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Mex3cQ05A36 652 aaKnown RBP14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Olfr119Q7TRJ5 321 aa14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Lrrc32G3XA59 663 aa14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Diaph2O70566 1098 aa14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Tagap1P0CAX8 505 aa14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ddb1Q3U1J4 1140 aaKnown RBP14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Gtpbp6Q3U6U5 514 aa14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Fgfr1opQ66JX5 399 aa14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Hdac4Q6NZM9 1076 aa14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Prpf3Q922U1 683 aaKnown RBP14.02□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Snx12O70493 165 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Tmod1P49813 359 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 GssP51855 474 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Camsap3Q80VC9 1252 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Llgl1Q80Y17 1036 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Dr1Q91WV0 176 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Eps8l2Q99K30 729 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Mis12Q9CY25 206 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Myl7Q9QVP4 175 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Nek3Q9R0A5 511 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Gm382B1AXN3 1250 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ccdc6D3YZP9 469 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Eya3P97480 510 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Znf428Q8C1M2 176 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ccdc28aQ8CEI3 192 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Taf6lQ8R2K4 616 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 P4hbP09103 509 aaKnown RBP14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Irx1P81068 480 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Glis3Q6XP49 780 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Gpr108Q91WD0 569 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Bag2Q91YN9 210 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Snrnp35Q9D384 244 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ehd4Q9EQP2 541 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Gm38392E9Q2A2 434 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Cacna2d1O08532 1103 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Cyp2d9P11714 504 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Stim2P83093 746 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Atp8b1Q148W0 1251 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ppp1r12cQ3UMT1 782 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Slc30a9Q5IRJ6 567 aa14.01□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 64.9 ms