RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Vipas39Q8BGQ1 491 aa20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Leng8Q8CBY3 785 aaKnown RBP20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Klra17Q9JMA4 273 aa20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Armc3A2AU72 881 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Hnrnph3D3Z3N4 346 aaKnown RBP20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Man1a2P39098 641 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Zc3h6Q8BYK8 1177 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Serpinb12Q9D7P9 423 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 FignQ9ERZ6 759 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 ThegQ9JMB1 375 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Dnajc21E9Q8D0 531 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Mcm7Q61881 719 aaKnown RBP20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Antxr2Q6DFX2 487 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Atxn2lQ7TQH0 1049 aaKnown RBP20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Bpifb6Q8BU51 449 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 AdpgkQ8VDL4 496 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 March8Q9DBD2 286 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Cd274Q9EP73 290 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Rpf2Q9JJ80 306 aaKnown RBP20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Trp53inp1Q9QXE4 239 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Psma7Q9Z2U0 248 aa20.87■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Gm1993A6X8I0 212 aa20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 SlxD3Z347 212 aa20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Pafah1b1P63005 410 aaKnown RBP20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Gtpbp6Q3U6U5 514 aa20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Mettl25Q6NXH8 597 aa20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Lca5Q80ST9 704 aa20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Plagl2Q925T4 496 aa20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Eef1gQ9D8N0 437 aaKnown RBP20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Tacc2Q9JJG0 1149 aa20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 LdhaP06151 332 aaKnown RBP20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Stim2P83093 746 aa20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Lilrb3P97484 841 aa20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Slc44a4Q91VA1 707 aa20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Glrx3Q9CQM9 337 aa20.86■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Gm30191A0A0U1RNT7 187 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Gm45208A0A140LJ36 292 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 EgfrQ01279 1210 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 MyrflQ3UN70 904 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 HrQ61645 1182 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Ccdc172Q810N9 267 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Zcchc17Q9ESX4 241 aaKnown RBP20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Magea10A2AMW4 325 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Prl2c2P04095 224 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Igsf3Q6ZQA6 1194 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 RtcbQ99LF4 505 aaKnown RBP20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Dnajc19Q9CQV7 116 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Akap8Q9DBR0 687 aaKnown RBP20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Trmt112Q9DCG9 125 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Fut8Q9WTS2 575 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Plcb1Q9Z1B3 1216 aa20.85■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 A430078G23RikE9Q7Y4 484 aa20.84■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Mkrn3Q60764 544 aa20.84■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Galnt17Q7TT15 598 aa20.84■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Arhgef19Q8BWA8 802 aa20.84■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Cdan1Q8CC12 1239 aa20.84■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Ndst4Q9EQW8 872 aa20.84■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Fxr2Q9WVR4 673 aaKnown RBP20.84■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Gm5114W4VSN8 858 aa20.84■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Asic3Q6X1Y6 530 aa20.83■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Prdm4Q80V63 803 aa20.83■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Cct8l1Q80YT3 562 aa20.83■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Igdcc3Q8BQC3 813 aa20.83■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Kif2bQ8C0N1 668 aa20.83■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Ifih1Q8R5F7 1025 aa20.83■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Trmt44Q9D2Q2 713 aa20.83■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 UncxO08934 530 aa20.83■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Carmil2Q3V3V9 1296 aa20.83■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Prl7b1Q8CGZ9 251 aa20.83■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Cfap100Q80VN0 613 aa20.82■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Kctd10Q922M3 315 aa20.82■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 JcadQ5DTX6 1320 aa20.82■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Arhgap6O54834 987 aa20.82■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 AsnsQ61024 561 aa20.82■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 SltmQ8CH25 1031 aaKnown RBP20.82■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Tldc1Q8K0P3 455 aa20.82■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Krt79Q8VED5 531 aa20.82■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Hps4Q99KG7 671 aa20.82■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 PtgdrP70263 357 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Gdf10P97737 476 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Pstpip1P97814 415 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Rcor2Q8C796 523 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Rbm5Q91YE7 815 aaKnown RBP20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Prpf6Q91YR7 941 aaKnown RBP20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Cwc15Q9JHS9 229 aaKnown RBP20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Knop1Q9Z2Q2 478 aaKnown RBP20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 VirmaA2AIV2 1811 aaKnown RBP20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Rsbn1lD3Z0K6 821 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Gfpt1P47856 697 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Pdrg1P59048 133 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Rnf40Q3U319 1001 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Pnma5Q5DTT8 618 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Cep70Q6IQY5 616 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 DaglaQ6WQJ1 1044 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Sdad1Q80UZ2 687 aaKnown RBP20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Drd5Q8BLD9 478 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Eno4Q8C042 619 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Eif4a3Q91VC3 411 aaKnown RBP20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Jag1Q9QXX0 1218 aa20.81■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Abcb4P21440 1276 aa20.8■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms