RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Enc1O35709 589 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Vgll3P85442 326 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Krt26Q3TRJ4 462 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ncoa4Q5U4H9 625 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Myl10Q62082 202 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ankfy1Q810B6 1169 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 TxlngQ8BHN1 524 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Rwdd2aQ9D9S3 292 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Fam217aQ9D9W6 419 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Fmnl1Q9JL26 1094 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ppp2r3dQ9Z176 491 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gm16486A0A1D5RMD1 1434 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 AnkarA2RT91 1465 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cyp2j7A0A140T8U1 504 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Fyb2A2A995 729 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Supt3B0QZW4 406 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Tex13cD3YU32 604 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Rsbn1lD3Z0K6 821 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Myo1eE9Q634 1107 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gucy1b3O54865 620 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Polr2fP61219 127 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Fam81aQ3UXZ6 364 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 AsnsQ61024 561 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 NntQ61941 1086 aaKnown RBP9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 WaplQ65Z40 1200 aaKnown RBP9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 OcrlQ6NVF0 900 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 ScocQ78YZ6 125 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Bank1Q80VH0 783 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Stn1Q8K2X3 378 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ccdc65Q8VHI7 493 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ppil4Q9CXG3 492 aaKnown RBP9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Kdm8Q9CXT6 414 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gstt4Q9D4P7 240 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Klc4Q9DBS5 619 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Arpp21Q9DCB4 807 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pex11aQ9Z211 246 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Plxnc1Q9QZC2 1574 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cep85lA0A1W2P884 806 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Actn3O88990 900 aaKnown RBP9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pde11aP0C1Q2 933 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Arl4aP61213 200 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Chl1P70232 1209 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Sema3eP70275 775 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Fam178bQ24JP3 464 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Olfr118Q7TRJ6 321 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pdik1lQ8QZR7 341 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Arl6ip4Q9JM93 229 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gbp4A4UUI3 631 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 IkbkbO88351 757 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 P4hbP09103 509 aaKnown RBP9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pnma5Q5DTT8 618 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Rab3ipQ68EF0 428 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Panx2Q6IMP4 677 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Clec16aQ80U30 1036 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ipo5Q8BKC5 1097 aaKnown RBP9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Daam1Q8BPM0 1077 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 HmcesQ8R1M0 353 aaKnown RBP9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Hip1Q8VD75 1029 aaKnown RBP9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Galnt15Q9D2N8 638 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Sdr42e1Q9D665 394 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Elmsan1E9Q2I4 1089 aaKnown RBP9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Sval3Q76I99 144 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 QarsQ8BML9 775 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Fermt3Q8K1B8 665 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 CtsqQ91ZF4 343 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 LratQ9JI60 231 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Syde2E9PUP1 1314 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Znf518aB2RRF6 1478 aaKnown RBP9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Dnaaf5B9EJR8 853 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Krt1P04104 637 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cyp11b2P15539 500 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Fdx1P46656 188 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Anks1aP59672 1150 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Nbr1P97432 988 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Zmym1Q3TJB1 983 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gm156Q58A37 223 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Epn1Q80VP1 575 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Sap130Q8BIH0 1057 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Mrpl11Q9CQF0 192 aaKnown RBP9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Rnf6Q9DBU5 667 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cbx6Q9DBY5 414 aa9.93□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Aox2Q5SGK3 1345 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Zfp174B9EJW5 407 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 TxkP42682 527 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 LmnaP48678 665 aaKnown RBP9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gm3414Q3TNU4 584 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ice2Q3UZ18 988 aaKnown RBP9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Adamts18Q4VC17 1219 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Map3k7Q62073 579 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Trim28Q62318 834 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Tmem132dQ76HP3 1097 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Slc39a6Q8C145 765 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Trim16Q99PP9 556 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 AticQ9CWJ9 592 aaKnown RBP9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 TbcbQ9D1E6 244 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pdzd9Q9D9M4 266 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Xab2Q9DCD2 855 aaKnown RBP9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Morf4l2Q9R0Q4 288 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Wdr46Q9Z0H1 622 aaKnown RBP9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Nup160Q9Z0W3 1402 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms