RNA–Protein interactions for RNA: YPL011C

TAF3, Transcript of TFIID subunit (47 kDa), yeast

Gene TAF3, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TAF3	YPL011C	YMR087W	Q04299	284 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	BUD22	Q04347	519 aa	Known RBP	4.03	□□□□□ -1.76
TAF3	YPL011C	HCR1	Q05775	265 aa	Known RBP	4.03	□□□□□ -1.76
TAF3	YPL011C	NOP58	Q12499	511 aa	Known RBP	4.03	□□□□□ -1.76
TAF3	YPL011C	MMS22	Q06164	1454 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	SPP41	P38904	1435 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	SAC6	P32599	642 aa	Known RBP	4.02	□□□□□ -1.77
TAF3	YPL011C	LOS1	P33418	1100 aa	Predicted RBP	4.02	□□□□□ -1.77
TAF3	YPL011C	RPL32	P38061	130 aa	Known RBP	4.02	□□□□□ -1.77
TAF3	YPL011C	FLC2	P39719	783 aa		4.02	□□□□□ -1.77
TAF3	YPL011C	YTA12	P40341	825 aa		4.02	□□□□□ -1.77
TAF3	YPL011C	YJL068C	P40363	299 aa		4.02	□□□□□ -1.77
TAF3	YPL011C	DRN1	P53255	507 aa	Known RBP	4.02	□□□□□ -1.77
TAF3	YPL011C	CRZ1	P53968	678 aa		4.02	□□□□□ -1.77
TAF3	YPL011C	RTT103	Q05543	409 aa		4.02	□□□□□ -1.77
TAF3	YPL011C	YEH2	Q07950	538 aa		4.02	□□□□□ -1.77
TAF3	YPL011C	MRP13	P12686	339 aa		4.01	□□□□□ -1.77
TAF3	YPL011C	PDA1	P16387	420 aa	Known RBP	4.01	□□□□□ -1.77
TAF3	YPL011C	ECM15	P35195	104 aa		4.01	□□□□□ -1.77
TAF3	YPL011C	ICS2	P38284	255 aa		4.01	□□□□□ -1.77
TAF3	YPL011C	DHH1	P39517	506 aa	Known RBP	4.01	□□□□□ -1.77
TAF3	YPL011C	RPC11	Q04307	110 aa	Predicted RBP	4.01	□□□□□ -1.77
TAF3	YPL011C	YEH1	Q07804	573 aa		4.01	□□□□□ -1.77
TAF3	YPL011C	HUA2	Q12134	243 aa		4.01	□□□□□ -1.77
TAF3	YPL011C	AAC3	P18238	307 aa		4	□□□□□ -1.77
TAF3	YPL011C	SAN1	P22470	610 aa		4	□□□□□ -1.77
TAF3	YPL011C	SNG1	P46950	547 aa		4	□□□□□ -1.77
TAF3	YPL011C	BUD32	P53323	261 aa		4	□□□□□ -1.77
TAF3	YPL011C	YOR365C	Q08844	703 aa		4	□□□□□ -1.77
TAF3	YPL011C	FMP40	Q08968	688 aa	Predicted RBP	4	□□□□□ -1.77
TAF3	YPL011C	TIP41	Q12199	356 aa		4	□□□□□ -1.77
TAF3	YPL011C	YBR298C-A	Q8TGK4	73 aa		4	□□□□□ -1.77
TAF3	YPL011C	YPT6	Q99260	215 aa		4	□□□□□ -1.77
TAF3	YPL011C	PEP5	P12868	1029 aa		3.99	□□□□□ -1.77
TAF3	YPL011C	VPS17	P32913	551 aa		3.99	□□□□□ -1.77
TAF3	YPL011C	UBP11	P36026	717 aa		3.99	□□□□□ -1.77
TAF3	YPL011C	CIN4	P39110	191 aa		3.99	□□□□□ -1.77
TAF3	YPL011C	DSD1	P53095	428 aa		3.99	□□□□□ -1.77
TAF3	YPL011C	DUG3	P53871	357 aa		3.99	□□□□□ -1.77
TAF3	YPL011C	SDH5	Q08230	162 aa		3.99	□□□□□ -1.77
TAF3	YPL011C	IKI3	Q06706	1349 aa	Known RBP	3.98	□□□□□ -1.77
TAF3	YPL011C	PEP4	P07267	405 aa	Known RBP	3.98	□□□□□ -1.77
TAF3	YPL011C	ART10	P18634	518 aa	Known RBP	3.98	□□□□□ -1.77
TAF3	YPL011C	OLE1	P21147	510 aa	Known RBP	3.98	□□□□□ -1.77
TAF3	YPL011C	ELO2	P25358	347 aa		3.98	□□□□□ -1.77
TAF3	YPL011C	SIP2	P34164	415 aa	Known RBP	3.98	□□□□□ -1.77
TAF3	YPL011C	YKL023W	P36103	277 aa	Known RBP	3.98	□□□□□ -1.77
TAF3	YPL011C	RRP3	P38712	501 aa	Known RBP	3.98	□□□□□ -1.77
TAF3	YPL011C	YHR210C	P38893	341 aa		3.98	□□□□□ -1.77
TAF3	YPL011C	CSM2	P40465	213 aa		3.98	□□□□□ -1.77
TAF3	YPL011C	IKS1	P47042	667 aa		3.98	□□□□□ -1.77
TAF3	YPL011C	ALT2	P52892	507 aa		3.98	□□□□□ -1.77
TAF3	YPL011C	YGR126W	P53274	230 aa		3.98	□□□□□ -1.77
TAF3	YPL011C	SHR3	Q02774	210 aa		3.98	□□□□□ -1.77
TAF3	YPL011C	SMC4	Q12267	1418 aa		3.97	□□□□□ -1.77
TAF3	YPL011C	RPL15A	P05748	204 aa	Known RBP	3.97	□□□□□ -1.77
TAF3	YPL011C	SEC53	P07283	254 aa	Known RBP	3.97	□□□□□ -1.77
TAF3	YPL011C	AMD1	P15274	810 aa	Known RBP	3.97	□□□□□ -1.77
TAF3	YPL011C	SEC62	P21825	274 aa		3.97	□□□□□ -1.77
TAF3	YPL011C	SGF29	P25554	259 aa		3.97	□□□□□ -1.77
TAF3	YPL011C	ATS1	P31386	333 aa		3.97	□□□□□ -1.77
TAF3	YPL011C	NOP4	P37838	685 aa	Known RBP	3.97	□□□□□ -1.77
TAF3	YPL011C	GLO2	Q05584	274 aa		3.97	□□□□□ -1.77
TAF3	YPL011C	COQ9	Q05779	260 aa		3.97	□□□□□ -1.77
TAF3	YPL011C	BNA5	Q05979	453 aa		3.97	□□□□□ -1.77
TAF3	YPL011C	CDC45	Q08032	650 aa		3.97	□□□□□ -1.77
TAF3	YPL011C	ENT1	Q12518	454 aa		3.97	□□□□□ -1.77
TAF3	YPL011C	UFD4	P33202	1483 aa		3.97	□□□□□ -1.77
TAF3	YPL011C	SUC2	P00724	532 aa		3.96	□□□□□ -1.78
TAF3	YPL011C	APE1	P14904	514 aa		3.96	□□□□□ -1.78
TAF3	YPL011C	OSH3	P38713	996 aa	Known RBP	3.96	□□□□□ -1.78
TAF3	YPL011C	KRE9	P39005	276 aa		3.96	□□□□□ -1.78
TAF3	YPL011C	VPS52	P39904	641 aa		3.96	□□□□□ -1.78
TAF3	YPL011C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
TAF3	YPL011C	YJR154W	P47181	346 aa		3.96	□□□□□ -1.78
TAF3	YPL011C	MRX6	P48564	524 aa		3.96	□□□□□ -1.78
TAF3	YPL011C	YGL082W	P53155	381 aa		3.96	□□□□□ -1.78
TAF3	YPL011C	CTI6	Q08923	506 aa		3.96	□□□□□ -1.78
TAF3	YPL011C	YJR112W-A	Q3E743	109 aa		3.96	□□□□□ -1.78
TAF3	YPL011C	RAD52	P06778	471 aa	Known RBP	3.95	□□□□□ -1.78
TAF3	YPL011C	PRP16	P15938	1071 aa	Predicted RBP	3.95	□□□□□ -1.78
TAF3	YPL011C	EST1	P17214	699 aa	Predicted RBP	3.95	□□□□□ -1.78
TAF3	YPL011C	AFG3	P39925	761 aa		3.95	□□□□□ -1.78
TAF3	YPL011C	RPR2	P40571	144 aa		3.95	□□□□□ -1.78
TAF3	YPL011C	RTT101	P47050	842 aa		3.95	□□□□□ -1.78
TAF3	YPL011C	IMD4	P50094	524 aa	Known RBP	3.95	□□□□□ -1.78
TAF3	YPL011C	COS10	P52924	374 aa		3.95	□□□□□ -1.78
TAF3	YPL011C	VID30	P53076	958 aa		3.95	□□□□□ -1.78
TAF3	YPL011C	IPI3	P53877	555 aa		3.95	□□□□□ -1.78
TAF3	YPL011C	ERP1	Q05359	219 aa	Known RBP	3.95	□□□□□ -1.78
TAF3	YPL011C	IMH1	Q06704	911 aa	Known RBP	3.95	□□□□□ -1.78
TAF3	YPL011C	YDL057W	Q07379	328 aa		3.95	□□□□□ -1.78
TAF3	YPL011C	SYO1	Q07395	620 aa		3.95	□□□□□ -1.78
TAF3	YPL011C	GFD2	P25370	566 aa	Known RBP	3.94	□□□□□ -1.78
TAF3	YPL011C	PRO3	P32263	286 aa	Known RBP	3.94	□□□□□ -1.78
TAF3	YPL011C	IMP2'	P32351	346 aa		3.94	□□□□□ -1.78
TAF3	YPL011C	SPC110	P32380	944 aa		3.94	□□□□□ -1.78
TAF3	YPL011C	SEF1	P34228	1148 aa		3.94	□□□□□ -1.78
TAF3	YPL011C	CAB3	P36076	571 aa		3.94	□□□□□ -1.78
TAF3	YPL011C	TCD2	P36101	447 aa	Known RBP	3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms