RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	GFD2	P25370	566 aa	Known RBP	5.2	□□□□□ -1.58
ULA1	YPL003W	BUB2	P26448	306 aa	Predicted RBP	5.2	□□□□□ -1.58
ULA1	YPL003W	SIN4	P32259	974 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	SFP1	P32432	683 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	COX13	P32799	129 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	RPS1A	P33442	255 aa	Known RBP	5.2	□□□□□ -1.58
ULA1	YPL003W	TIP20	P33891	701 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	LRG1	P35688	1017 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	YPT52	P36018	234 aa	Known RBP	5.2	□□□□□ -1.58
ULA1	YPL003W	FRE2	P36033	711 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	MED8	P38304	223 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	DBP8	P38719	431 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	PCL5	P38794	229 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	SSN3	P39073	555 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	JEM1	P40358	645 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	VMA13	P41807	478 aa	Known RBP	5.2	□□□□□ -1.58
ULA1	YPL003W	RMD8	P43620	662 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	SET2	P46995	733 aa	Known RBP	5.2	□□□□□ -1.58
ULA1	YPL003W	EMC4	P53073	190 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	SWC4	P53201	476 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	PEX13	P80667	386 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	GAS3	Q03655	524 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	YHM2	Q04013	314 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	YDR444W	Q04093	687 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	YET2	Q04210	160 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	HFD1	Q04458	532 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	GLO2	Q05584	274 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	CDA1	Q06702	301 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	VAM6	Q07468	1049 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	IRC10	Q08118	586 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	UAF30	Q08747	228 aa		5.2	□□□□□ -1.58
ULA1	YPL003W	TRP3	P00937	484 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	SPT3	P06844	337 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	HIS5	P07172	385 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	COS2	P0CX12	379 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	COS3	P0CX13	379 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	DAT1	P13483	248 aa	Known RBP	5.19	□□□□□ -1.58
ULA1	YPL003W	EPT1	P22140	391 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	SPS22	P25380	463 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	IMG2	P25642	146 aa	Predicted RBP	5.19	□□□□□ -1.58
ULA1	YPL003W	PHO91	P27514	894 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	STE5	P32917	917 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	CSE1	P33307	960 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	YHR020W	P38708	688 aa	Known RBP	5.19	□□□□□ -1.58
ULA1	YPL003W	DHH1	P39517	506 aa	Known RBP	5.19	□□□□□ -1.58
ULA1	YPL003W	MET18	P40469	1032 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	COS4	P43542	379 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	YFR018C	P43599	363 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	MTR3	P48240	250 aa	Predicted RBP	5.19	□□□□□ -1.58
ULA1	YPL003W	SAM37	P50110	327 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	IMA1	P53051	589 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	COG7	P53195	279 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	ERP6	P53198	216 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	ARC35	P53731	342 aa	Known RBP	5.19	□□□□□ -1.58
ULA1	YPL003W	FRE4	P53746	719 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	PRO2	P54885	456 aa	Known RBP	5.19	□□□□□ -1.58
ULA1	YPL003W	ISU1	Q03020	165 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	YDR476C	Q03362	224 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	BCH1	Q05029	724 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	RIF2	Q06208	395 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	GRS2	Q06817	618 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	NSE1	Q07913	336 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	YEH2	Q07950	538 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	SGT1	Q08446	395 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	MCH5	Q08777	521 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	PIN2	Q12057	282 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	YLR049C	Q12110	428 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	CMR1	Q12510	522 aa	Known RBP	5.19	□□□□□ -1.58
ULA1	YPL003W	TY4A-H	Q6Q5P6	413 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	SAS5	Q99314	248 aa		5.19	□□□□□ -1.58
ULA1	YPL003W	CET1	O13297	549 aa	Predicted RBP	5.18	□□□□□ -1.58
ULA1	YPL003W	RPS14A	P06367	137 aa	Known RBP	5.18	□□□□□ -1.58
ULA1	YPL003W	YAR066W	P0CX18	203 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	YHR214W	P0CX19	203 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	SEC63	P14906	663 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	GUK1	P15454	187 aa	Known RBP	5.18	□□□□□ -1.58
ULA1	YPL003W	VPS34	P22543	875 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	CSM1	P25651	190 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	CRM1	P30822	1084 aa	Known RBP	5.18	□□□□□ -1.58
ULA1	YPL003W	ATP7	P30902	174 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	ZIP1	P31111	875 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	PTC1	P35182	281 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	HSE1	P38753	452 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	UBA4	P38820	440 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	CYC2	P38909	366 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	RPS14B	P39516	138 aa	Known RBP	5.18	□□□□□ -1.58
ULA1	YPL003W	NPT1	P39683	429 aa	Known RBP	5.18	□□□□□ -1.58
ULA1	YPL003W	FKH2	P41813	862 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	GCD10	P41814	478 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	GAT1	P43574	510 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	YJL049W	P47048	450 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	MPS3	P47069	682 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	YJR154W	P47181	346 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	NAS6	P50086	228 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	YGL108C	P53139	140 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	NMA2	P53204	395 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	YGR053C	P53234	283 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	COS6	P53344	381 aa		5.18	□□□□□ -1.58
ULA1	YPL003W	CLU1	Q03690	1277 aa	Known RBP	5.18	□□□□□ -1.58
ULA1	YPL003W	TRM12	Q04235	462 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms